RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 XKRXQ6PP77 449 aa20.72■□□□□ 0.91
SNIP1-203ENST00000493916 KIRREL3Q8IZU9 778 aa20.72■□□□□ 0.91
SNIP1-203ENST00000493916 LIX1Q8N485 282 aa20.72■□□□□ 0.91
SNIP1-203ENST00000493916 ZNF781Q8N8C0 355 aa20.72■□□□□ 0.91
SNIP1-203ENST00000493916 ZFP28Q8NHY6 868 aa20.72■□□□□ 0.91
SNIP1-203ENST00000493916 CIDECQ96AQ7 238 aaPredicted RBP20.72■□□□□ 0.91
SNIP1-203ENST00000493916 ZBED6CLQ96FA7 236 aaPredicted RBP20.72■□□□□ 0.91
SNIP1-203ENST00000493916 NODALQ96S42 347 aa20.72■□□□□ 0.91
SNIP1-203ENST00000493916 UBQLN3Q9H347 655 aa20.72■□□□□ 0.91
SNIP1-203ENST00000493916 ZNF395Q9H8N7 513 aaPredicted RBP20.72■□□□□ 0.91
SNIP1-203ENST00000493916 ACSS1Q9NUB1 689 aaPredicted RBP20.72■□□□□ 0.91
SNIP1-203ENST00000493916 ATP6V1HQ9UI12 483 aa20.72■□□□□ 0.91
SNIP1-203ENST00000493916 HAO1Q9UJM8 370 aa20.72■□□□□ 0.91
SNIP1-203ENST00000493916 RAP2CQ9Y3L5 183 aa20.72■□□□□ 0.91
SNIP1-203ENST00000493916 NBPF19A0A087WUL8 3843 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 TRGV5A0A0B4J1U4 118 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 NPIPA2E9PIF3 369 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 NPIPA3F8WFD2 350 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 TSPAN2O60636 221 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 BGNP21810 368 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 ELAVL4P26378 380 aaKnown RBP20.71■□□□□ 0.91
SNIP1-203ENST00000493916 RPL3P39023 403 aaKnown RBP20.71■□□□□ 0.91
SNIP1-203ENST00000493916 SLC1A6P48664 564 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 MASP1P48740 699 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 PSG6Q00889 435 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 HSPB3Q12988 150 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 EFR3AQ14156 821 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 EMC4Q5J8M3 183 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 DESI1Q6ICB0 168 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 C3P1Q6ZMU1 363 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 ZNF551Q7Z340 670 aaPredicted RBP20.71■□□□□ 0.91
SNIP1-203ENST00000493916 SLC44A2Q8IWA5 706 aaPredicted RBP20.71■□□□□ 0.91
SNIP1-203ENST00000493916 FNDC5Q8NAU1 212 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 TUBGCP3Q96CW5 907 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 TMCO6Q96DC7 493 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 SORT1Q99523 831 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 OSBPL11Q9BXB4 747 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 C20orf27Q9GZN8 174 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 LDAHQ9H6V9 325 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 SH3BP4Q9P0V3 963 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 C15orf41Q9Y2V0 281 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 HRH3Q9Y5N1 445 aa20.71■□□□□ 0.91
SNIP1-203ENST00000493916 KLF2Q9Y5W3 355 aaPredicted RBP20.71■□□□□ 0.91
SNIP1-203ENST00000493916 PRAMEF25A6NGN4 478 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 SCAMP2O15127 329 aaKnown RBP20.7■□□□□ 0.9
SNIP1-203ENST00000493916 REM1O75628 298 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 PRPS2P11908 318 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 ENDOUP21128 410 aaKnown RBP20.7■□□□□ 0.9
SNIP1-203ENST00000493916 GDF1P27539 372 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 KRT20P35900 424 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 PTGDSP41222 190 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 SLC18A1P54219 525 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 SMU1Q2TAY7 513 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 RNF138Q8WVD3 245 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 SARAFQ96BY9 339 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 C1orf50Q9BV19 199 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 KLRF1Q9NZS2 232 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 NTMQ9P121 344 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 OR10H1Q9Y4A9 318 aa20.7■□□□□ 0.9
SNIP1-203ENST00000493916 NCOA6Q14686 2063 aaPredicted RBP20.69■□□□□ 0.9
SNIP1-203ENST00000493916 TMEM120BA0PK00 339 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 TTC36A6NLP5 189 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 ICOSLGO75144 302 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 HPNP05981 417 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 IL12BP29460 328 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 GPC1P35052 558 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 CDK9P50750 372 aaKnown RBP20.69■□□□□ 0.9
SNIP1-203ENST00000493916 RPL14P50914 215 aaKnown RBP20.69■□□□□ 0.9
SNIP1-203ENST00000493916 PNLIPRP2P54317 469 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 MRPS22P82650 360 aaKnown RBP20.69■□□□□ 0.9
SNIP1-203ENST00000493916 MAD2L1Q13257 205 aaPredicted RBP20.69■□□□□ 0.9
SNIP1-203ENST00000493916 STX3Q13277 289 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 PTGR1Q14914 329 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 MLC1Q15049 377 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 PDCD2Q16342 344 aaPredicted RBP20.69■□□□□ 0.9
SNIP1-203ENST00000493916 CYP27C1Q4G0S4 372 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 GXYLT1Q4G148 440 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 HHATQ5VTY9 493 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 IL23RQ5VWK5 629 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 TIGD3Q6B0B8 471 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 NCCRP1Q6ZVX7 275 aaPredicted RBP20.69■□□□□ 0.9
SNIP1-203ENST00000493916 LARP4Q71RC2 724 aaKnown RBP eCLIP20.69■□□□□ 0.9
SNIP1-203ENST00000493916 ANKRD42Q8N9B4 389 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 NEIL3Q8TAT5 605 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 TLCD1Q96CP7 247 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 GNRHR2Q96P88 292 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 ADOQ96SZ5 270 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 LMF2Q9BU23 707 aaKnown RBP20.69■□□□□ 0.9
SNIP1-203ENST00000493916 EXO5Q9H790 373 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 TMBIM4Q9HC24 238 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 GALNT9Q9HCQ5 603 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 PNPLA3Q9NST1 481 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 ASIC5Q9NY37 505 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 SPRR3Q9UBC9 169 aa20.69■□□□□ 0.9
SNIP1-203ENST00000493916 GTF3C1Q12789 2109 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 MYO7BQ6PIF6 2116 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 SNPHO15079 494 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 COL8A1P27658 744 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 PTPN6P29350 595 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 MANFP55145 182 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms