RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 A8MVJ9 347 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 C1QTNF9BB2RNN3 333 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 WWP2O00308 870 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 SLC28A2O43868 658 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 C1QTNF9P0C862 333 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 CT45A8P0DMV1 189 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 CT45A9P0DMV2 189 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 NCK1P16333 377 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 AQP1P29972 269 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 CDC20Q12834 499 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 CT45A2Q5DJT8 189 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 DCAF10Q5QP82 559 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 FIGNL1Q6PIW4 674 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 FBXW8Q8N3Y1 598 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 ANKFN1Q8N957 763 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 M1APQ8TC57 530 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 ELP5Q8TE02 316 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 ADIPOR1Q96A54 375 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 REXO5Q96IC2 774 aaKnown RBP17.94■□□□□ 0.46
USP39-218ENST00000493829 BTBD9Q96Q07 612 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 DPH1Q9BZG8 443 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 PCDHAC1Q9H158 963 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 PIGUQ9H490 435 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 Q9N2J8 555 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 MMP25Q9NPA2 562 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 P2RX2Q9UBL9 471 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 NCOR2Q9Y618 2525 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 PRAMEF27A3QJZ7 478 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 GSTA4O15217 222 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 ZFAND5O76080 213 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 NKX2-2O95096 273 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 NR2F1P10589 423 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 SCARB2Q14108 478 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 GPAT3Q53EU6 434 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 EXOSC6Q5RKV6 272 aaKnown RBP17.93■□□□□ 0.46
USP39-218ENST00000493829 ATAD3BQ5T9A4 648 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 ZCCHC12Q6PEW1 402 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 NET1Q7Z628 596 aaPredicted RBP17.93■□□□□ 0.46
USP39-218ENST00000493829 HMGN2P46Q86SG4 172 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 SPACA3Q8IXA5 215 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 MICU2Q8IYU8 434 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 SIRT6Q8N6T7 355 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 IP6K3Q96PC2 410 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 STACQ99469 402 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 AP3M1Q9Y2T2 418 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 GPR55Q9Y2T6 319 aaPredicted RBP17.93■□□□□ 0.46
USP39-218ENST00000493829 RAXQ9Y2V3 346 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 ELOVL7A1L3X0 281 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 EFSO43281 561 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 ASNA1O43681 348 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 ARAFP10398 606 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 HSD17B1P14061 328 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 ME2P23368 584 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 EIF2S3P41091 472 aaKnown RBP17.93■□□□□ 0.46
USP39-218ENST00000493829 MAP3K8P41279 467 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 POU6F2P78424 691 aaPredicted RBP17.93■□□□□ 0.46
USP39-218ENST00000493829 VMACQ2NL98 169 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 DCST2Q5T1A1 773 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 TCTN3Q6NUS6 607 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 KBTBD2Q8IY47 623 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 ARHGAP24Q8N264 748 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 C11orf65Q8NCR3 313 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 SLC38A5Q8WUX1 472 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 FIG4Q92562 907 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 TMEM19Q96HH6 336 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 THOC3Q96J01 351 aaKnown RBP17.93■□□□□ 0.46
USP39-218ENST00000493829 LCORQ96JN0 433 aaPredicted RBP17.93■□□□□ 0.46
USP39-218ENST00000493829 A4GALTQ9NPC4 353 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 DUSP22Q9NRW4 184 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 EXD2Q9NVH0 621 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 DKK4Q9UBT3 224 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 SLC7A8Q9UHI5 535 aa17.93■□□□□ 0.46
USP39-218ENST00000493829 FRG2CA6NGY1 282 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 DUXAA6NLW8 204 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 C5orf58C9J3I9 102 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 MAN1A2O60476 641 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 DNAJA2O60884 412 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 BMP2P12643 396 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 ITGA3P26006 1051 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 PPICP45877 212 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 ERFP50548 548 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 CDK6Q00534 326 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 RAPSNQ13702 412 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 ZSCAN1Q8NBB4 408 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 CLEC1AQ8NC01 280 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 BRIX1Q8TDN6 353 aaKnown RBP17.92■□□□□ 0.46
USP39-218ENST00000493829 HOXB13Q92826 284 aaPredicted RBP17.92■□□□□ 0.46
USP39-218ENST00000493829 FBXO34Q9NWN3 711 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 GIN1Q9NXP7 522 aa17.92■□□□□ 0.46
USP39-218ENST00000493829 TMEM247A6NEH6 219 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 TMEM200CA6NKL6 621 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 H6PDO95479 791 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 SERPINA7P05543 415 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 CHRM4P08173 479 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 ICAM2P13598 275 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 NQO1P15559 274 aaKnown RBP17.91■□□□□ 0.46
USP39-218ENST00000493829 PCGF2P35227 344 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 MRPS22P82650 360 aaKnown RBP17.91■□□□□ 0.46
USP39-218ENST00000493829 HPCAP84074 193 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 MAPK11Q15759 364 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms