RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 HPS4Q9NQG7 708 aa2.88□□□□□ -1.95
ITGB1-216ENST00000493758 CYP39A1Q9NYL5 469 aa2.88□□□□□ -1.95
ITGB1-216ENST00000493758 HMG20BQ9P0W2 317 aa2.88□□□□□ -1.95
ITGB1-216ENST00000493758 PDE10AQ9Y233 779 aa2.88□□□□□ -1.95
ITGB1-216ENST00000493758 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
ITGB1-216ENST00000493758 ZMYM6O95789 1325 aa2.88□□□□□ -1.95
ITGB1-216ENST00000493758 TLR4O00206 839 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 ATP6V1G1O75348 118 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 HSPB1P04792 205 aaKnown RBP2.87□□□□□ -1.95
ITGB1-216ENST00000493758 ABHD2P08910 425 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 SLC6A8P48029 635 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 POU3F4P49335 361 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 NLRP11P59045 1033 aaKnown RBP2.87□□□□□ -1.95
ITGB1-216ENST00000493758 SERTAD2Q14140 314 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 ZNF658Q5TYW1 1059 aaPredicted RBP2.87□□□□□ -1.95
ITGB1-216ENST00000493758 YRDCQ86U90 279 aaKnown RBP2.87□□□□□ -1.95
ITGB1-216ENST00000493758 C9orf40Q8IXQ3 194 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 SFRP1Q8N474 314 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 ZNF397Q8NF99 534 aaPredicted RBP2.87□□□□□ -1.95
ITGB1-216ENST00000493758 APOOQ9BUR5 198 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 FTHL17Q9BXU8 183 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 ALG9Q9H6U8 611 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 MID1IP1Q9NPA3 183 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 EHFQ9NZC4 300 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 KLRF1Q9NZS2 232 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 SLC2A6Q9UGQ3 507 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 ABCG2Q9UNQ0 655 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 TEX264Q9Y6I9 313 aa2.87□□□□□ -1.95
ITGB1-216ENST00000493758 TDRD6O60522 2096 aaKnown RBP2.86□□□□□ -1.95
ITGB1-216ENST00000493758 IGKV6D-21A0A0A0MT36 114 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 LATO43561 262 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 KINO60870 393 aaKnown RBP2.86□□□□□ -1.95
ITGB1-216ENST00000493758 IGSF6O95976 241 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 CXCL10P02778 98 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 PRB2P02812 416 aaPredicted RBP2.86□□□□□ -1.95
ITGB1-216ENST00000493758 IDSP22304 550 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 NUMBP49757 651 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 LASP1Q14847 261 aaKnown RBP2.86□□□□□ -1.95
ITGB1-216ENST00000493758 CAMK4Q16566 473 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 SCARA5Q6ZMJ2 495 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 PAQR9Q6ZVX9 377 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 AMZ2Q86W34 360 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 IQCA1Q86XH1 822 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 CNTN4Q8IWV2 1026 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 CADM2Q8N3J6 435 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 OR2L5Q8NG80 312 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 OR4F17Q8NGA8 305 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 ATP6V1E2Q96A05 226 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 DNAJA3Q96EY1 480 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 IMMP1LQ96LU5 166 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 TECTBQ96PL2 329 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 OR4F4Q96R69 305 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 NDUFAF3Q9BU61 184 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 TM2D1Q9BX74 207 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 TEX13AQ9BXU3 409 aaPredicted RBP2.86□□□□□ -1.95
ITGB1-216ENST00000493758 PRO0461Q9UI25 63 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 APPL1Q9UKG1 709 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 BARX2Q9UMQ3 279 aaPredicted RBP2.86□□□□□ -1.95
ITGB1-216ENST00000493758 TNRQ92752 1358 aa2.86□□□□□ -1.95
ITGB1-216ENST00000493758 MACROD2A1Z1Q3 448 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 TM9SF1O15321 606 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 PNPP00491 289 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 IGLV1-47P01700 117 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 TMOD1P28289 359 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 STX17P56962 302 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 C17orf67Q0P5P2 114 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 PPP1R8Q12972 351 aaKnown RBP2.85□□□□□ -1.95
ITGB1-216ENST00000493758 NME3Q13232 169 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 DCAF4L1Q3SXM0 396 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 LRIT3Q3SXY7 679 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 OTPQ5XKR4 325 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 UFSP1Q6NVU6 142 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 OLFM4Q6UX06 510 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 BNIPLQ7Z465 357 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 GOLGA7Q7Z5G4 137 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 CCDC91Q7Z6B0 441 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 CEND1Q8N111 149 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 OR52J3Q8NH60 311 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 ST7LQ8TDW4 575 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 DEFB118Q96PH6 123 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 HOMER3Q9NSC5 361 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 GALPQ9UBC7 116 aa2.85□□□□□ -1.95
ITGB1-216ENST00000493758 ZNF490Q9ULM2 529 aaPredicted RBP2.85□□□□□ -1.95
ITGB1-216ENST00000493758 A0A0J9YVX5 310 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 SDC1P18827 310 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 PSMB1P20618 241 aaKnown RBP2.84□□□□□ -1.95
ITGB1-216ENST00000493758 ACVR1BP36896 505 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 RIPK4P57078 832 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 OC90Q02509 493 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-216ENST00000493758 PUDPQ08623 228 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 ZP4Q12836 540 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 RPA4Q13156 261 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 IL18R1Q13478 541 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 ZKSCAN8Q15776 578 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-216ENST00000493758 CYBRD1Q53TN4 286 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 MEDAGQ5VYS4 303 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 DMKNQ6E0U4 476 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-216ENST00000493758 ZNF530Q6P9A1 599 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-216ENST00000493758 MOB1BQ7L9L4 216 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 CCDC36Q8IYA8 594 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms