RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 SLC35C2Q9NQQ7 365 aa15.72■□□□□ 0.11
SGMS1-204ENST00000492601 SENP1Q9P0U3 644 aa15.72■□□□□ 0.11
SGMS1-204ENST00000492601 EXO1Q9UQ84 846 aaKnown RBP15.72■□□□□ 0.11
SGMS1-204ENST00000492601 OR6C70A6NIJ9 312 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 SYT5O00445 386 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 GCKP35557 465 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 KIR2DL3P43628 341 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 SF3B4Q15427 424 aaKnown RBP eCLIP15.71■□□□□ 0.11
SGMS1-204ENST00000492601 PRSS53Q2L4Q9 553 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 GALNT18Q6P9A2 607 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 POMZP3Q6PJE2 187 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 NPSR1Q6W5P4 371 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 ZYG11AQ6WRX3 759 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 SAMD14Q8IZD0 417 aaPredicted RBP15.71■□□□□ 0.11
SGMS1-204ENST00000492601 FAM9CQ8IZT9 166 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 OR7G2Q8NG99 324 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 ERP27Q96DN0 273 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 C11orf24Q96F05 449 aaPredicted RBP15.71■□□□□ 0.11
SGMS1-204ENST00000492601 VSTM2LQ96N03 204 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 SH3GL2Q99962 352 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 DNAJB12Q9NXW2 375 aaKnown RBP15.71■□□□□ 0.11
SGMS1-204ENST00000492601 CRIM1Q9NZV1 1036 aa15.71■□□□□ 0.11
SGMS1-204ENST00000492601 NUP214P35658 2090 aaPredicted RBP15.71■□□□□ 0.1
SGMS1-204ENST00000492601 SMIM23A6NLE4 172 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 GLRA3O75311 464 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 CBR3O75828 277 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 ACTL6AO96019 429 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 SHBGP04278 402 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 JUNP05412 331 aaKnown RBP15.7■□□□□ 0.1
SGMS1-204ENST00000492601 TCEA1P23193 301 aaKnown RBP15.7■□□□□ 0.1
SGMS1-204ENST00000492601 IL12BP29460 328 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 KRT20P35900 424 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 SLCO1A2P46721 670 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 SRYQ05066 204 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 ZNF763Q0D2J5 394 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 ZNF155Q12901 538 aaPredicted RBP15.7■□□□□ 0.1
SGMS1-204ENST00000492601 RCAN2Q14206 197 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 IMPG1Q17R60 797 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 OR5M10Q6IEU7 315 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 LARP4Q71RC2 724 aaKnown RBP eCLIP15.7■□□□□ 0.1
SGMS1-204ENST00000492601 SLC44A2Q8IWA5 706 aaPredicted RBP15.7■□□□□ 0.1
SGMS1-204ENST00000492601 OR4N2Q8NGD1 307 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 RNASE6Q93091 150 aaKnown RBP15.7■□□□□ 0.1
SGMS1-204ENST00000492601 EFHD2Q96C19 240 aaPredicted RBP15.7■□□□□ 0.1
SGMS1-204ENST00000492601 CCDC126Q96EE4 140 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 LRRC46Q96FV0 321 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 SLC35A4Q96G79 324 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 SHCBP1LQ9BZQ2 653 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 OR2B2Q9GZK3 357 aa15.7■□□□□ 0.1
SGMS1-204ENST00000492601 C12orf65Q9H3J6 166 aaKnown RBP15.7■□□□□ 0.1
SGMS1-204ENST00000492601 ZNF629Q9UEG4 869 aaPredicted RBP15.7■□□□□ 0.1
SGMS1-204ENST00000492601 POLR3HQ9Y535 204 aaPredicted RBP15.7■□□□□ 0.1
SGMS1-204ENST00000492601 ZFHX3Q15911 3703 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 SERTM1A2A2V5 107 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 MBD3L4A6NDZ8 208 aaPredicted RBP15.69■□□□□ 0.1
SGMS1-204ENST00000492601 MBD3L3A6NE82 208 aaPredicted RBP15.69■□□□□ 0.1
SGMS1-204ENST00000492601 MBD3L5A6NJ08 208 aaPredicted RBP15.69■□□□□ 0.1
SGMS1-204ENST00000492601 CD8B2A6NJW9 211 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 PLOD3O60568 738 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 TSPAN2O60636 221 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 ABCB7O75027 752 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 CRCPO75575 148 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 CTAG2O75638 210 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 PROCP04070 461 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 CYP4B1P13584 511 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 DDCP20711 480 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 DNAJA1P31689 397 aaKnown RBP15.69■□□□□ 0.1
SGMS1-204ENST00000492601 MPIP34949 423 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 STARP49675 285 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 NCBP2P52298 156 aaKnown RBP eCLIP15.69■□□□□ 0.1
SGMS1-204ENST00000492601 CEBPEQ15744 281 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 CFAP157Q5JU67 520 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 SH2D4BQ5SQS7 431 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 PLXDC2Q6UX71 529 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 SPNS3Q6ZMD2 512 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 FRMD7Q6ZUT3 714 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 SH2D5Q6ZV89 423 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 IFNEQ86WN2 208 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 PLCZ1Q86YW0 608 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 TRIM42Q8IWZ5 723 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 CCDC63Q8NA47 563 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 C9orf106Q8NAJ2 232 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 MBD3L2Q8NHZ7 208 aaPredicted RBP15.69■□□□□ 0.1
SGMS1-204ENST00000492601 UBLCP1Q8WVY7 318 aaPredicted RBP15.69■□□□□ 0.1
SGMS1-204ENST00000492601 TUBA1CQ9BQE3 449 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 GPATCH1Q9BRR8 931 aaKnown RBP15.69■□□□□ 0.1
SGMS1-204ENST00000492601 POLDIP3Q9BY77 421 aaKnown RBP15.69■□□□□ 0.1
SGMS1-204ENST00000492601 CALHM2Q9HA72 323 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 TNFRSF12AQ9NP84 129 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 MIEF1Q9NQG6 463 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 SIRT5Q9NXA8 310 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 TAS2R10Q9NYW0 307 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 FBXL2Q9UKC9 423 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 OR10H1Q9Y4A9 318 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 WIF1Q9Y5W5 379 aa15.69■□□□□ 0.1
SGMS1-204ENST00000492601 ACANP16112 2415 aa15.68■□□□□ 0.1
SGMS1-204ENST00000492601 C17orf51A8MQB3 221 aa15.68■□□□□ 0.1
SGMS1-204ENST00000492601 MYO1GB0I1T2 1018 aa15.68■□□□□ 0.1
SGMS1-204ENST00000492601 EEF1E1-BLOC1S5C9J1V9 151 aa15.68■□□□□ 0.1
SGMS1-204ENST00000492601 H0Y3Z8 333 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms