RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 PDIA5Q14554 519 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 LTB4RQ15722 352 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 ZIC1Q15915 447 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 TOR1AIP1Q5JTV8 583 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 LDLRAP1Q5SW96 308 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 MARC1Q5VT66 337 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 PRR5LQ6MZQ0 368 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 IRGCQ6NXR0 463 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 VITQ6UXI7 678 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 BAIAP2L2Q6UXY1 529 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 RBM43Q6ZSC3 357 aaKnown RBP2.99□□□□□ -1.93
VTA1-204ENST00000491881 PRSS48Q7RTY5 328 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 VPS36Q86VN1 386 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 RNF148Q8N7C7 305 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 OR56B1Q8NGI3 324 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 DQX1Q8TE96 717 aaKnown RBP2.99□□□□□ -1.93
VTA1-204ENST00000491881 DLX4Q92988 240 aaPredicted RBP2.99□□□□□ -1.93
VTA1-204ENST00000491881 PIWIL1Q96J94 861 aaKnown RBP2.99□□□□□ -1.93
VTA1-204ENST00000491881 SAMD8Q96LT4 415 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 C9orf85Q96MD7 179 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 WRAP53Q9BUR4 548 aaKnown RBP2.99□□□□□ -1.93
VTA1-204ENST00000491881 CARD6Q9BX69 1037 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 NMNAT2Q9BZQ4 307 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 KRT23Q9C075 422 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 C1orf21Q9H246 121 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 FAM114A2Q9NRY5 505 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 SLC7A10Q9NS82 523 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 NINJ2Q9NZG7 142 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 ZNF107Q9UII5 783 aaPredicted RBP2.99□□□□□ -1.93
VTA1-204ENST00000491881 PLEKHA6Q9Y2H5 1048 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 NAALAD2Q9Y3Q0 740 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 RNF115Q9Y4L5 304 aa2.99□□□□□ -1.93
VTA1-204ENST00000491881 KLF2Q9Y5W3 355 aaPredicted RBP2.99□□□□□ -1.93
VTA1-204ENST00000491881 UBE4BO95155 1302 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 ARAP1Q96P48 1450 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 CCT8L1PA6NM43 557 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 PDLIM1O00151 329 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 SAP18O00422 153 aaKnown RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 PHOX2AO14813 284 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 LCMT2O60294 686 aaKnown RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 HOXB7P09629 217 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 ARF4P18085 180 aaPredicted RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 MAPK3P27361 379 aaPredicted RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 ASMTP46597 345 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 RABIFP47224 123 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 ARHGDIBP52566 201 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 GMFBP60983 142 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 GABPB1Q06547 395 aaPredicted RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 KARSQ15046 597 aaKnown RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 PKN2Q16513 984 aaKnown RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 ZSWIM7Q19AV6 140 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 LRIT3Q3SXY7 679 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 Q6ZR54 194 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 PAQR9Q6ZVX9 377 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 LINC00612Q8N6U2 182 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 NCLNQ969V3 563 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 TADA1Q96BN2 335 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 PPP1R16AQ96I34 528 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 RANBP9Q96S59 729 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 ROPN1Q9HAT0 212 aaPredicted RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 DCAF13Q9NV06 445 aaKnown RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 DUS2Q9NX74 493 aaKnown RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 KLRF1Q9NZS2 232 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 PIN4Q9Y237 131 aaKnown RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 NTNG1Q9Y2I2 539 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.98□□□□□ -1.93
VTA1-204ENST00000491881 NOTCH2Q04721 2471 aa2.98□□□□□ -1.93
VTA1-204ENST00000491881 UNC79Q9P2D8 2635 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 IGLV3-10A0A075B6K4 115 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 TRBV7-9A0A0J9YWB2 115 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 H3BTX0 84 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 PRPSAP2O60256 369 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 STAM2O75886 525 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 NDUFA7O95182 113 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 PGAM2P15259 253 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 TSPAN8P19075 237 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 PTPN4P29074 926 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 PTPN6P29350 595 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 STK19P49842 368 aaPredicted RBP2.97□□□□□ -1.93
VTA1-204ENST00000491881 CSRP3P50461 194 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 PPIAP62937 165 aaKnown RBP2.97□□□□□ -1.93
VTA1-204ENST00000491881 ZP4Q12836 540 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 PARP10Q53GL7 1025 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 DMKNQ6E0U4 476 aaPredicted RBP2.97□□□□□ -1.93
VTA1-204ENST00000491881 RAET1GQ6H3X3 334 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 PNCKQ6P2M8 343 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 CCBE1Q6UXH8 406 aaPredicted RBP2.97□□□□□ -1.93
VTA1-204ENST00000491881 UNC5CLQ8IV45 518 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 ZBED8Q8IZ13 594 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 ARFGAP2Q8N6H7 521 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 CD177Q8N6Q3 437 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 KLHL30-AS1Q8NEE0 82 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 ZPLD1Q8TCW7 415 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 DNAJA3Q96EY1 480 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 C14orf79Q96F83 325 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 SERAC1Q96JX3 654 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 KCNK16Q96T55 309 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 SOHLH2Q9NX45 425 aa2.97□□□□□ -1.93
VTA1-204ENST00000491881 GHRLQ9UBU3 117 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms