RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 NDUFS4O43181 175 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 TNFRSF21O75509 655 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 TNFRSF1BP20333 461 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 CDH12P55289 794 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 HBA1P69905 142 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 ELOAQ14241 798 aaKnown RBP21.35■■□□□ 1.01
USF3-203ENST00000491165 MAPK11Q15759 364 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 USP43Q70EL4 1123 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 CCDC103Q8IW40 242 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 UBE2E3Q969T4 207 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 TCTN2Q96GX1 697 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 CDC6Q99741 560 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 MS4A8Q9BY19 250 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 KLHL31Q9H511 634 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 ZNF768Q9H5H4 540 aaKnown RBP21.35■■□□□ 1.01
USF3-203ENST00000491165 GPATCH2Q9NW75 528 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 METTL15A6NJ78 407 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 H0YGG7 62 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 GADD45AP24522 165 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 PIK3CBP42338 1070 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 IDH2P48735 452 aaKnown RBP21.34■■□□□ 1.01
USF3-203ENST00000491165 LIMK1P53667 647 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 ARF3P61204 181 aaPredicted RBP21.34■■□□□ 1.01
USF3-203ENST00000491165 TEKQ02763 1124 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 RBBP4Q09028 425 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 ZNF763Q0D2J5 394 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 SCARB2Q14108 478 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 MICAQ29983 383 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 SLC22A16Q86VW1 577 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 LGI4Q8N135 537 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 DEPDC4Q8N2C3 294 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 KCT2Q8NC54 265 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 OR52N2Q8NGI0 321 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 OR52J3Q8NH60 311 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 KLHL6Q8WZ60 621 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 TM4SF19Q96DZ7 209 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 SLC41A2Q96JW4 573 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 SLC35A5Q9BS91 424 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 AMBNQ9NP70 447 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 FOXE1O00358 373 aaPredicted RBP21.34■■□□□ 1.01
USF3-203ENST00000491165 TM4SF5O14894 197 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 GFRA3O60609 400 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 FOLR1P15328 257 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 ITGA2P17301 1181 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 AHRP35869 848 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 MLLT3P42568 568 aaPredicted RBP21.34■■□□□ 1.01
USF3-203ENST00000491165 CASP9P55211 416 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 TUBA3EQ6PEY2 450 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 NCCRP1Q6ZVX7 275 aaPredicted RBP21.34■■□□□ 1.01
USF3-203ENST00000491165 ZNF605Q86T29 641 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 LACC1Q8IV20 430 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 ZNF675Q8TD23 568 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 F2RL3Q96RI0 385 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 PDE7BQ9NP56 450 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 THSD1Q9NS62 852 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 RLIMQ9NVW2 624 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 FREM2Q5SZK8 3169 aa21.34■■□□□ 1.01
USF3-203ENST00000491165 OR1E2P47887 323 aa21.33■■□□□ 1.01
USF3-203ENST00000491165 VSX2P58304 361 aaPredicted RBP21.33■■□□□ 1.01
USF3-203ENST00000491165 HSD11B2P80365 405 aa21.33■■□□□ 1.01
USF3-203ENST00000491165 EXOC3L2Q2M3D2 409 aa21.33■■□□□ 1.01
USF3-203ENST00000491165 SLC46A3Q7Z3Q1 461 aa21.33■■□□□ 1.01
USF3-203ENST00000491165 SORBS1Q9BX66 1292 aaKnown RBP21.33■■□□□ 1.01
USF3-203ENST00000491165 POLE4Q9NR33 117 aa21.33■■□□□ 1.01
USF3-203ENST00000491165 ISPDA4D126 451 aa21.32■■□□□ 1
USF3-203ENST00000491165 LRIT2A6NDA9 550 aa21.32■■□□□ 1
USF3-203ENST00000491165 A8MVJ9 347 aa21.32■■□□□ 1
USF3-203ENST00000491165 TAF4O00268 1085 aa21.32■■□□□ 1
USF3-203ENST00000491165 HYAL3O43820 417 aaPredicted RBP21.32■■□□□ 1
USF3-203ENST00000491165 RFPL3O75679 317 aa21.32■■□□□ 1
USF3-203ENST00000491165 UPK1BO75841 260 aa21.32■■□□□ 1
USF3-203ENST00000491165 C6orf47O95873 294 aa21.32■■□□□ 1
USF3-203ENST00000491165 EIF2S1P05198 315 aaKnown RBP21.32■■□□□ 1
USF3-203ENST00000491165 PRIM2P49643 509 aa21.32■■□□□ 1
USF3-203ENST00000491165 TMED10P49755 219 aaKnown RBP21.32■■□□□ 1
USF3-203ENST00000491165 INSM1Q01101 510 aaPredicted RBP21.32■■□□□ 1
USF3-203ENST00000491165 GPR19Q15760 415 aa21.32■■□□□ 1
USF3-203ENST00000491165 D2HGDHQ8N465 521 aa21.32■■□□□ 1
USF3-203ENST00000491165 AMER2Q8N7J2 671 aa21.32■■□□□ 1
USF3-203ENST00000491165 NFKBIDQ8NI38 313 aa21.32■■□□□ 1
USF3-203ENST00000491165 COL21A1Q96P44 957 aa21.32■■□□□ 1
USF3-203ENST00000491165 NIPSNAP1Q9BPW8 284 aa21.32■■□□□ 1
USF3-203ENST00000491165 GPR83Q9NYM4 423 aa21.32■■□□□ 1
USF3-203ENST00000491165 ZNF226Q9NYT6 803 aa21.32■■□□□ 1
USF3-203ENST00000491165 A3GALT2U3KPV4 340 aa21.32■■□□□ 1
USF3-203ENST00000491165 SAGE2PA6NJ88 616 aa21.32■■□□□ 1
USF3-203ENST00000491165 RTCAO00442 366 aaKnown RBP21.32■■□□□ 1
USF3-203ENST00000491165 CLEC3AO75596 197 aa21.32■■□□□ 1
USF3-203ENST00000491165 NUDT6P53370 316 aa21.32■■□□□ 1
USF3-203ENST00000491165 ZFP36L1Q07352 338 aaKnown RBP21.32■■□□□ 1
USF3-203ENST00000491165 GLRX5Q86SX6 157 aa21.32■■□□□ 1
USF3-203ENST00000491165 MCATQ8IVS2 390 aaKnown RBP21.32■■□□□ 1
USF3-203ENST00000491165 CARFQ8N187 725 aa21.32■■□□□ 1
USF3-203ENST00000491165 STX19Q8N4C7 294 aa21.32■■□□□ 1
USF3-203ENST00000491165 UTP15Q8TED0 518 aaKnown RBP21.32■■□□□ 1
USF3-203ENST00000491165 TMEM38AQ9H6F2 299 aa21.32■■□□□ 1
USF3-203ENST00000491165 ZNF556Q9HAH1 456 aa21.32■■□□□ 1
USF3-203ENST00000491165 LHX9Q9NQ69 397 aa21.32■■□□□ 1
USF3-203ENST00000491165 ZNF229Q9UJW7 825 aa21.32■■□□□ 1
USF3-203ENST00000491165 A0A0G2JN53 185 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms