RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TNK1Q13470 666 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 ETFDHQ16134 617 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 NNATQ16517 81 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 BEX5Q5H9J7 111 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 C22orf34Q6ZV56 151 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 SH2D5Q6ZV89 423 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 CYS1Q717R9 158 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 ZNF550Q7Z398 422 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 P4HA3Q7Z4N8 544 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 HIPK1Q86Z02 1210 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 TEX9Q8N6V9 391 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 ZNF611Q8N823 705 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 CNEP1R1Q8N9A8 125 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 L3MBTL4Q8NA19 623 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 RDH11Q8TC12 318 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 EXT2Q93063 718 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 TMCO6Q96DC7 493 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 SLC35A4Q96G79 324 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 ZNF845Q96IR2 970 aaPredicted RBP7.39□□□□□ -1.23
USP39-216ENST00000490193 SFXN2Q96NB2 322 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 CPNE1Q99829 537 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 TMEM204Q9BSN7 226 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 OPN3Q9H1Y3 402 aaPredicted RBP7.39□□□□□ -1.23
USP39-216ENST00000490193 ALG9Q9H6U8 611 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 RNF122Q9H9V4 155 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 PRM3Q9NNZ6 103 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 MAT2BQ9NZL9 334 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 HEY2Q9UBP5 337 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 FBXL2Q9UKC9 423 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 ADAM29Q9UKF5 820 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 CES1P1Q9UKY3 287 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 ZNF175Q9Y473 711 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.38□□□□□ -1.23
USP39-216ENST00000490193 GOLGA6L10A6NI86 522 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 CXorf49A8MYA2 514 aaPredicted RBP7.38□□□□□ -1.23
USP39-216ENST00000490193 B4DXG7 233 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 SUPT3HB4E1H0 165 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 UBXN8O00124 270 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 HS3ST1O14792 307 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 TLX2O43763 284 aaPredicted RBP7.38□□□□□ -1.23
USP39-216ENST00000490193 TSPAN2O60636 221 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 SUPT3HO75486 399 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 TNFRSF21O75509 655 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 PIAS1O75925 651 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 CBX7O95931 251 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 F12P00748 615 aaPredicted RBP7.38□□□□□ -1.23
USP39-216ENST00000490193 IFNA2P01563 188 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 GBAP04062 536 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 THBDP07204 575 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 TBXA2RP21731 343 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 EMDP50402 254 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 GAS1P54826 345 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 NR1H2P55055 460 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 ATP5J2P56134 94 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 DSCR4P56555 118 aaPredicted RBP7.38□□□□□ -1.23
USP39-216ENST00000490193 CLDN15P56746 228 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 EEFSECP57772 596 aaKnown RBP7.38□□□□□ -1.23
USP39-216ENST00000490193 PSPHP78330 225 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 C10orf62Q5T681 223 aaPredicted RBP7.38□□□□□ -1.23
USP39-216ENST00000490193 HMBOX1Q6NT76 420 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 SLC48A1Q6P1K1 146 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 METTL2BQ6P1Q9 378 aaKnown RBP7.38□□□□□ -1.23
USP39-216ENST00000490193 FAM111BQ6SJ93 734 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 ZNF704Q6ZNC4 412 aaPredicted RBP7.38□□□□□ -1.23
USP39-216ENST00000490193 MYLK4Q86YV6 388 aaPredicted RBP7.38□□□□□ -1.23
USP39-216ENST00000490193 LRRC8AQ8IWT6 810 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 ZNF511Q8NB15 262 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 RHEBL1Q8TAI7 183 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 TRPC4APQ8TEL6 797 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 TMEM158Q8WZ71 300 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 FIG4Q92562 907 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 CDKL2Q92772 493 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 COL21A1Q96P44 957 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 BTBD9Q96Q07 612 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 CDK15Q96Q40 435 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 SERPINI1Q99574 410 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 NMRAL1Q9HBL8 299 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 EHD3Q9NZN3 535 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 TXNDC16Q9P2K2 825 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 PRODH2Q9UF12 536 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 SNX12Q9UMY4 172 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 GPR55Q9Y2T6 319 aaPredicted RBP7.38□□□□□ -1.23
USP39-216ENST00000490193 ACOT9Q9Y305 439 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 PCDHA9Q9Y5H5 950 aa7.38□□□□□ -1.23
USP39-216ENST00000490193 ANK2Q01484 3957 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 C1orf226A1L170 272 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 FAM159BA6NKW6 160 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 SYCE1LA8MT33 242 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 EFCAB8A8MWE9 144 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 LINC01387J3KSC0 135 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 OVOL3O00110 214 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 CD5LO43866 347 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 THBS1P07996 1170 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 LTA4HP09960 611 aaKnown RBP7.37□□□□□ -1.23
USP39-216ENST00000490193 NID1P14543 1247 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 CSNK2A2P19784 350 aaPredicted RBP7.37□□□□□ -1.23
USP39-216ENST00000490193 GRK2P25098 689 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 DPP4P27487 766 aa7.37□□□□□ -1.23
USP39-216ENST00000490193 SPRP35270 261 aaPredicted RBP7.37□□□□□ -1.23
USP39-216ENST00000490193 KCNJ5P48544 419 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms