RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 PARPBPQ9NWS1 579 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 SLC17A6Q9P2U8 582 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 SAR1BQ9Y6B6 198 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF536O15090 1300 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF609O15014 1411 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 HELTA6NFD8 242 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 NPIPA2E9PIF3 369 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 LMO7DNF2Z398 122 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 OR7A17O14581 309 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 CYTH3O43739 400 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 LCA5LO95447 670 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 CST1P01037 141 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 LINC00271P0C7V0 271 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 CNR2P34972 360 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 TMPOP42166 694 aaKnown RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 RGS4P49798 205 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 SERPINB8P50452 374 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 PDLIM4P50479 330 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 TUBA4AP68366 448 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 DMP1Q13316 513 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 MFAP5Q13361 173 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 VEZF1Q14119 521 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 ARHGEF6Q15052 776 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 GPR33Q49SQ1 333 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 OTUD3Q5T2D3 398 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 Q6ZSR3 168 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 TMEM26Q6ZUK4 368 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 SLC7A5P1Q8MH63 180 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 PELI3Q8N2H9 469 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 DCLK2Q8N568 766 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 C1orf52Q8N6N3 182 aaKnown RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 LRRC17Q8N6Y2 441 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 NECAB1Q8N987 351 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 MLKLQ8NB16 471 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 AENQ8WTP8 325 aaKnown RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 TMEM45BQ96B21 275 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 INPP4AQ96PE3 977 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 CCDC28BQ9BUN5 200 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 TIPINQ9BVW5 301 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 GALPQ9UBC7 116 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 FAF1Q9UNN5 650 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 PPIL1Q9Y3C6 166 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 LOXL2Q9Y4K0 774 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 SIPA1L1O43166 1804 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 CHD4Q14839 1912 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 THSD7BQ9C0I4 1608 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 A0A1W2PPW3 197 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 SMIM23A6NLE4 172 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 MID1O15344 667 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 NVLO15381 856 aaKnown RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 EXTL3O43909 919 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 HIST1H2AGP0C0S8 130 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 FAM157CP0CG43 387 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 IRF2P14316 349 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CCNB1P14635 433 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 GABRA5P31644 462 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PRDX2P32119 198 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ISL1P61371 349 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 MRPS25P82663 173 aaKnown RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 HPCAP84074 193 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 HHEXQ03014 270 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 KPNB1Q14974 876 aaKnown RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 STK38Q15208 465 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 KCNA10Q16322 511 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 TAF1BQ53T94 588 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 VAX1Q5SQQ9 334 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 FAM122CQ6P4D5 195 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PARM1Q6UWI2 310 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ASB18Q6ZVZ8 466 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CYB5R4Q7L1T6 521 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 TIPARPQ7Z3E1 657 aaKnown RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CCDC25Q86WR0 208 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 IFT20Q8IY31 132 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ST13P4Q8IZP2 240 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PRR26Q8N8Z3 221 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 NUDCD2Q8WVJ2 157 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 HIST1H2ACQ93077 130 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 AP2M1Q96CW1 435 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF479Q96JC4 524 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CCDC42Q96M95 316 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ZIM3Q96PE6 472 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PLIN2Q99541 437 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 OVOL2Q9BRP0 275 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ALKBH7Q9BT30 221 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PARVGQ9HBI0 331 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CYTH4Q9UIA0 394 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 PURGQ9UJV8 347 aaKnown RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 MAN1B1Q9UKM7 699 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 FBXO4Q9UKT5 387 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 EMCNQ9ULC0 261 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 FADS3Q9Y5Q0 445 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 SALL1Q9NSC2 1324 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 A0A0J9YVX5 310 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 CCDC162PA2VCL2 907 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 GOLGA8OA6NCC3 632 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF99A8MXY4 864 aaPredicted RBP2.61□□□□□ -1.99
UBXN4-208ENST00000490163 ERVV-2B6SEH9 535 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 F8W810 466 aa2.61□□□□□ -1.99
UBXN4-208ENST00000490163 GOLGA8NF8WBI6 632 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms