RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RNF111Q6ZNA4 994 aa19.41■□□□□ 0.7
SND1-214ENST00000489417 ZNF321PQ8N8H1 164 aa19.41■□□□□ 0.7
SND1-214ENST00000489417 ZNF721Q8TF20 911 aa19.41■□□□□ 0.7
SND1-214ENST00000489417 SLC47A1Q96FL8 570 aa19.41■□□□□ 0.7
SND1-214ENST00000489417 SLC46A1Q96NT5 459 aa19.41■□□□□ 0.7
SND1-214ENST00000489417 ZNF607Q96SK3 696 aa19.41■□□□□ 0.7
SND1-214ENST00000489417 TREX2Q9BQ50 279 aaPredicted RBP19.41■□□□□ 0.7
SND1-214ENST00000489417 MAGIXQ9H6Y5 334 aa19.41■□□□□ 0.7
SND1-214ENST00000489417 C19orf25Q9UFG5 118 aaPredicted RBP19.41■□□□□ 0.7
SND1-214ENST00000489417 A0A0G2JPF8 293 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 HNRNPCL2B2RXH8 293 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 HNRNPCL3B7ZW38 293 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 SUV39H1O43463 412 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 H6PDO95479 791 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 AK1P00568 194 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 HNRNPCL4P0DMR1 293 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 RAP2AP10114 183 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 GABRA3P34903 492 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 HPCAP84074 193 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 ARHGAP11BQ3KRB8 267 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 LRRC74BQ6ZQY2 392 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 OLIG3Q7RTU3 272 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 KRT73Q86Y46 540 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 PQLC1Q8N2U9 271 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 CHDHQ8NE62 594 aaPredicted RBP19.4■□□□□ 0.7
SND1-214ENST00000489417 OR10Q1Q8NGQ4 319 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 CT55Q8WUE5 264 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 ADAMTS14Q8WXS8 1223 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 HSH2DQ96JZ2 352 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 NUDT9Q9BW91 350 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 CDV3Q9UKY7 258 aaKnown RBP19.4■□□□□ 0.7
SND1-214ENST00000489417 CFL2Q9Y281 166 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 DTX4Q9Y2E6 619 aa19.4■□□□□ 0.7
SND1-214ENST00000489417 IGHV3-20A0A0C4DH32 117 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 SAGE2PA6NJ88 616 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 HNRNPRO43390 633 aaKnown RBP19.39■□□□□ 0.69
SND1-214ENST00000489417 TIPRLO75663 272 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 KLF7O75840 302 aaPredicted RBP19.39■□□□□ 0.69
SND1-214ENST00000489417 RAB40ALP0C0E4 278 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 HOXB6P17509 224 aaKnown RBP19.39■□□□□ 0.69
SND1-214ENST00000489417 SESN3P58005 492 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 POU6F2P78424 691 aaPredicted RBP19.39■□□□□ 0.69
SND1-214ENST00000489417 PSG6Q00889 435 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 DCST2Q5T1A1 773 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 CPEB2Q7Z5Q1 589 aaKnown RBP19.39■□□□□ 0.69
SND1-214ENST00000489417 MARCH9Q86YJ5 346 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 GALNT15Q8N3T1 639 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 ESX1Q8N693 406 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 OR1N1Q8NGS0 311 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 OR2Y1Q8NGV0 311 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 PIK3R3Q92569 461 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 TPD52L3Q96J77 140 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 COL21A1Q96P44 957 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 PKP2Q99959 881 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 CHID1Q9BWS9 393 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 BTBD2Q9BX70 525 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 ITPAQ9BY32 194 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 SLC38A1Q9H2H9 487 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 POLR1BQ9H9Y6 1135 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 C6orf203Q9P0P8 240 aaPredicted RBP19.39■□□□□ 0.69
SND1-214ENST00000489417 COPS7AQ9UBW8 275 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 PADI2Q9Y2J8 665 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 GPC6Q9Y625 555 aaPredicted RBP19.39■□□□□ 0.69
SND1-214ENST00000489417 ZFHX2Q9C0A1 2572 aaPredicted RBP19.39■□□□□ 0.69
SND1-214ENST00000489417 SEC16AO15027 2179 aa19.39■□□□□ 0.69
SND1-214ENST00000489417 ZNF292O60281 2723 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 GXYLT2A0PJZ3 443 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 TMEM229AB2RXF0 380 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 TPST1O60507 370 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 SERPINB7O75635 380 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 UMODP07911 640 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 ETS2P15036 469 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 FOLR3P41439 243 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 SELENOWP63302 87 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 GABREP78334 506 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 FAM69BQ5VUD6 431 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 PAPD4Q6PIY7 484 aaKnown RBP19.38■□□□□ 0.69
SND1-214ENST00000489417 NPSR1Q6W5P4 371 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 VTCN1Q7Z7D3 282 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 LILRA2Q8N149 483 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 LRTOMTQ8WZ04 291 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 LZICQ8WZA0 190 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 SDF2Q99470 211 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 MESP1Q9BRJ9 268 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 DOHHQ9BU89 302 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 YY1AP1Q9H869 796 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 STOML1Q9UBI4 398 aa19.38■□□□□ 0.69
SND1-214ENST00000489417 DSPPQ9NZW4 1301 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 MFN2O95140 757 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 SEMG1P04279 462 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 FCGR1AP12314 374 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 TRHRP34981 398 aaPredicted RBP19.37■□□□□ 0.69
SND1-214ENST00000489417 CHRNEQ04844 493 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 CCNJQ5T5M9 372 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 FRRS1Q6ZNA5 592 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 FKBP9P1Q75LS8 142 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 ERMP1Q7Z2K6 904 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 ARMC8Q8IUR7 673 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 NFAM1Q8NET5 270 aaPredicted RBP19.37■□□□□ 0.69
SND1-214ENST00000489417 BTBD9Q96Q07 612 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms