RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 SNX6Q9UNH7 406 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 DLGAP4Q9Y2H0 992 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 WIF1Q9Y5W5 379 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 A0A1W2PNV4 684 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 A8MXE2 369 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 B4DXG7 233 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 PPP6CO00743 305 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 MSTNO14793 375 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 TO15178 435 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 SMPD2O60906 423 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 SMNDC1O75940 238 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNX17-207ENST00000489402 CBX7O95931 251 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 PDYNP01213 254 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 CRHP06850 196 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 HEXAP06865 529 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 INHBAP08476 426 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 PCSK2P16519 638 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 ZNF708P17019 499 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 STARP49675 285 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 EMDP50402 254 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 LHX2P50458 406 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 GFRA1P56159 465 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 MRPS22P82650 360 aaKnown RBP8.49□□□□□ -1.05
SNX17-207ENST00000489402 MRPS35P82673 323 aaKnown RBP8.49□□□□□ -1.05
SNX17-207ENST00000489402 HMGCS1Q01581 520 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 GUCY2DQ02846 1103 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 GALNT1Q10472 559 aaPredicted RBP8.49□□□□□ -1.05
SNX17-207ENST00000489402 EFR3AQ14156 821 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 LTB4RQ15722 352 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 ERCC6LQ2NKX8 1250 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 Q5PR19 223 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 OR2A2Q6IF42 318 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 MED12LQ86YW9 2145 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 SAMD14Q8IZD0 417 aaPredicted RBP8.49□□□□□ -1.05
SNX17-207ENST00000489402 PLD6Q8N2A8 252 aaKnown RBP8.49□□□□□ -1.05
SNX17-207ENST00000489402 C1orf52Q8N6N3 182 aaKnown RBP8.49□□□□□ -1.05
SNX17-207ENST00000489402 ZNF675Q8TD23 568 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 ZNF592Q92610 1267 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 ANP32BQ92688 251 aaKnown RBP8.49□□□□□ -1.05
SNX17-207ENST00000489402 TMBIM1Q969X1 311 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 TM4SF18Q96CE8 201 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 SLC35A4Q96G79 324 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 FAM111AQ96PZ2 611 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 ADOQ96SZ5 270 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 ACSS3Q9H6R3 686 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 ZBTB26Q9HCK0 441 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 GIMAP4Q9NUV9 329 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 SENP1Q9P0U3 644 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 XPR1Q9UBH6 696 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 UTS2RQ9UKP6 389 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 GPR55Q9Y2T6 319 aaPredicted RBP8.49□□□□□ -1.05
SNX17-207ENST00000489402 TESMINQ9Y4I5 508 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 NAV3Q8IVL0 2385 aa8.49□□□□□ -1.05
SNX17-207ENST00000489402 ZANQ9Y493 2812 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 SLC22A20A6NK97 555 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 HCRTR2O43614 444 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 CTAGE8P0CG41 777 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 PEPDP12955 493 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 HSD3B1P14060 373 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 FPR1P21462 350 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 TCEA1P23193 301 aaKnown RBP8.48□□□□□ -1.05
SNX17-207ENST00000489402 GRK2P25098 689 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 HSD3B2P26439 372 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 DPP4P27487 766 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 CASQ1P31415 396 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 CLDN18P56856 261 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 OR5M10Q6IEU7 315 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 LARP4Q71RC2 724 aaKnown RBP eCLIP8.48□□□□□ -1.05
SNX17-207ENST00000489402 CXorf67Q86X51 503 aaPredicted RBP8.48□□□□□ -1.05
SNX17-207ENST00000489402 KRTAP1-3Q8IUG1 177 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 CTAGE4Q8IX94 777 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 UBQLNLQ8IYU4 475 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 LRRC75A-AS1Q8N1F1 130 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 MEIOBQ8N635 442 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 CNEP1R1Q8N9A8 125 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 OR4K17Q8NGC6 315 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 ERP27Q96DN0 273 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 CNRIP1Q96F85 164 aaPredicted RBP8.48□□□□□ -1.05
SNX17-207ENST00000489402 BTBD9Q96Q07 612 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 PIP5K1AQ99755 562 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 MRPL57Q9BQC6 102 aaKnown RBP8.48□□□□□ -1.05
SNX17-207ENST00000489402 MED18Q9BUE0 208 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 G6PC3Q9BUM1 346 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 ANKRA2Q9H9E1 313 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 FARSBQ9NSD9 589 aaKnown RBP8.48□□□□□ -1.05
SNX17-207ENST00000489402 PPP4R1LQ9P1A2 415 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 TRPS1Q9UHF7 1281 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 FBXL2Q9UKC9 423 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 NFU1Q9UMS0 254 aa8.48□□□□□ -1.05
SNX17-207ENST00000489402 MRPS18CQ9Y3D5 142 aaKnown RBP8.48□□□□□ -1.05
SNX17-207ENST00000489402 UQCRHLA0A096LP55 91 aa8.47□□□□□ -1.05
SNX17-207ENST00000489402 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.47□□□□□ -1.05
SNX17-207ENST00000489402 GNG14A0A1W2PPG7 69 aa8.47□□□□□ -1.05
SNX17-207ENST00000489402 ESYT3A0FGR9 886 aa8.47□□□□□ -1.05
SNX17-207ENST00000489402 CTIFO43310 598 aaKnown RBP8.47□□□□□ -1.05
SNX17-207ENST00000489402 TNFSF13O75888 250 aa8.47□□□□□ -1.05
SNX17-207ENST00000489402 OR4F21O95013 312 aa8.47□□□□□ -1.05
SNX17-207ENST00000489402 TGM6O95932 706 aa8.47□□□□□ -1.05
SNX17-207ENST00000489402 KRT6AP02538 564 aa8.47□□□□□ -1.05
SNX17-207ENST00000489402 KRT6BP04259 564 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms