RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 BRWD1-AS2P59051 145 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 PLP1P60201 277 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 CSNK2BP67870 215 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 MRPS6P82932 125 aaKnown RBP3.02□□□□□ -1.93
PRPF4-203ENST00000488937 PAX5Q02548 391 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 ZP4Q12836 540 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 MFAP5Q13361 173 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 ILKQ13418 452 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 ITGA9Q13797 1035 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 KLF5Q13887 457 aaPredicted RBP3.02□□□□□ -1.93
PRPF4-203ENST00000488937 GK3PQ14409 553 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF234Q14588 700 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 ITIH4Q14624 930 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 TGFBIQ15582 683 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 EXT1Q16394 746 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 GGTA1PQ4G0N0 100 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 OTUD3Q5T2D3 398 aaPredicted RBP3.02□□□□□ -1.93
PRPF4-203ENST00000488937 PDZK1Q5T2W1 519 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 NDUFAF5Q5TEU4 345 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 FAM71F2Q6NXP2 309 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 LEG1Q6P5S2 330 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 C17orf107Q6ZR85 190 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 SLC16A12Q6ZSM3 486 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 Q6ZSV7 163 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 COPS6Q7L5N1 327 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 SSX9Q7RTT3 188 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 ANKRD37Q7Z713 158 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 ITIH5Q86UX2 942 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 VRK2Q86Y07 508 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 MICU2Q8IYU8 434 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 FAM58AQ8N1B3 248 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 PARP8Q8N3A8 854 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 GATSQ8NAP1 163 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 POC1AQ8NBT0 407 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 CCDC197Q8NCU1 140 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 OR1F12Q8NHA8 337 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 ANGPTL6Q8NI99 470 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 NDNFQ8TB73 568 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 MARCH1Q8TCQ1 289 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 CD300LFQ8TDQ1 290 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 PDCD6IPQ8WUM4 868 aaKnown RBP3.02□□□□□ -1.93
PRPF4-203ENST00000488937 TMEM255BQ8WV15 326 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 PIK3R3Q92569 461 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 SLC35C1Q96A29 364 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 NSMCE3Q96MG7 304 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 TECTBQ96PL2 329 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 TMEM175Q9BSA9 504 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 DCTN5Q9BTE1 182 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 TRIM62Q9BVG3 475 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 ST6GALNAC5Q9BVH7 336 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 CCDC94Q9BW85 323 aaPredicted RBP3.02□□□□□ -1.93
PRPF4-203ENST00000488937 OR52A5Q9H2C5 316 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 LRMDAQ9H2I8 198 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 RHBGQ9H310 441 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 LRRN3Q9H3W5 708 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 DPEP2Q9H4A9 486 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 RHOJQ9H4E5 214 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 ELOVL6Q9H5J4 265 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 AZI2Q9H6S1 392 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 MTHFD2LQ9H903 347 aaPredicted RBP3.02□□□□□ -1.93
PRPF4-203ENST00000488937 CHRAC1Q9NRG0 131 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 TMEM45AQ9NWC5 275 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 MTCH1Q9NZJ7 389 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 GNG12Q9UBI6 72 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 LCMT1Q9UIC8 334 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 FBXL4Q9UKA2 621 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 PILRBQ9UKJ0 227 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 RASD1Q9Y272 281 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 NCKAP1Q9Y2A7 1128 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 NEURL4Q96JN8 1562 aa3.02□□□□□ -1.93
PRPF4-203ENST00000488937 ZMYM2Q9UBW7 1377 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 IGHV4-28A0A0C4DH34 117 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 A0A0G2JNG1 304 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ERICH2A1L162 156 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 RSPH10B2B2RC85 870 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF814B7Z6K7 855 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 HIP1O00291 1037 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 NR5A2O00482 541 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 OR7A17O14581 309 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 IMPA2O14732 288 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 MID1O15344 667 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 RS1O15537 224 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 CNOT3O75175 753 aaKnown RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 GAGE7O76087 117 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 UMODP07911 640 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ERCC1P07992 297 aaPredicted RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 F7P08709 466 aaPredicted RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 RSPH10BP0C881 870 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 FAM106CPP0CH98 169 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 GAGE12FP0CL80 117 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 GAGE12GP0CL81 117 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 GAGE12IP0CL82 117 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 CCL2P13500 99 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ATP1B2P14415 290 aaPredicted RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 GSTM3P21266 225 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 LCN1P31025 176 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 CASP14P31944 242 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 RPL3P39023 403 aaKnown RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 HTR5AP47898 357 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms