RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PTTG2Q9NZH5 202 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 BTNL2Q9UIR0 455 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 CES1P1Q9UKY3 287 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 A0A087WXM4 84 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 A0A1W2PS29 197 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 SNAP29O95721 258 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 IGHEP01854 428 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 GPX2P18283 190 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 GSTM5P46439 218 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 ALDH9A1P49189 494 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 LRRC74AQ0VAA2 488 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 EPS8Q12929 822 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 CPZQ66K79 652 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 SLC48A1Q6P1K1 146 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 ZNF551Q7Z340 670 aaPredicted RBP18.06■□□□□ 0.48
CCM2-216ENST00000488727 TRIML2Q8N7C3 387 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 METTL21AQ8WXB1 218 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 TANKQ92844 425 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 GFM2Q969S9 779 aaKnown RBP18.06■□□□□ 0.48
CCM2-216ENST00000488727 PANX1Q96RD7 426 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 FAIM2Q9BWQ8 316 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 SPATA9Q9BWV2 254 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 VCX3AQ9NNX9 186 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 TCRBV16S1A1N1A0A5B0 115 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 K7ENP7 123 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 CLIC1O00299 241 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 SERPINA1P01009 418 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 CST1P01037 141 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 THRBP10828 461 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 HPCAL1P37235 193 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 MAGEA2P43356 314 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 TMPRSS3P57727 454 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 IGLV3-21P80748 117 aaPredicted RBP18.05■□□□□ 0.48
CCM2-216ENST00000488727 C2orf80Q0P641 193 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 ATP1A4Q13733 1029 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 HEPACAMQ14CZ8 416 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 INO80CQ6PI98 192 aaPredicted RBP18.05■□□□□ 0.48
CCM2-216ENST00000488727 ANKRD37Q7Z713 158 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 RAB43Q86YS6 212 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 ZDHHC13Q8IUH4 622 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 NACC2Q96BF6 587 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 SDCCAG3Q96C92 435 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 PYURFQ96I23 114 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 DUSP26Q9BV47 211 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 SLC24A3Q9HC58 644 aa18.05■□□□□ 0.48
CCM2-216ENST00000488727 SAMD4AQ9UPU9 718 aaKnown RBP18.05■□□□□ 0.48
CCM2-216ENST00000488727 LOC102723996A0A087X1L8 192 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 IGHV3-20A0A0C4DH32 117 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 DRD2P14416 443 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 PPP2R1BP30154 601 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 UCNP55089 124 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 EEF1A2Q05639 463 aaKnown RBP18.04■□□□□ 0.48
CCM2-216ENST00000488727 LSAMPQ13449 338 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 PRSS53Q2L4Q9 553 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 ANXA8L1Q5VT79 327 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 FAM180BQ6P0A1 224 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 IKBIPQ70UQ0 350 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 ZZZ3Q8IYH5 903 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 ZNF786Q8N393 782 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 AMER2Q8N7J2 671 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 ZSCAN1Q8NBB4 408 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 OR11G2Q8NGC1 345 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 COQ8BQ96D53 544 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 P4HTMQ9NXG6 502 aa18.04■□□□□ 0.48
CCM2-216ENST00000488727 WBP11Q9Y2W2 641 aaKnown RBP18.04■□□□□ 0.48
CCM2-216ENST00000488727 G3V2T6 193 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 MASP2O00187 686 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 DDCP20711 480 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 PPIBP23284 216 aaKnown RBP18.03■□□□□ 0.48
CCM2-216ENST00000488727 PPP2R2BQ00005 443 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 STX4Q12846 297 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 ZNF750Q32MQ0 723 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 STK32CQ86UX6 486 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 OR5K1Q8NHB7 308 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 CRELD1Q96HD1 420 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 OSBPL10Q9BXB5 764 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 ALOXE3Q9BYJ1 711 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 ATP6V1HQ9UI12 483 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 MGAQ8IWI9 3026 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 USP24Q9UPU5 2620 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 IGHV1-45A0A0A0MS14 117 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 A0A1W2PQ72 361 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 PCDH17O14917 1159 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 GPR75O95800 540 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 LAMP1P11279 417 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 COX6A1P12074 109 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 VAC14Q08AM6 782 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 VMACQ2NL98 169 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 OTUD3Q5T2D3 398 aaPredicted RBP18.03■□□□□ 0.48
CCM2-216ENST00000488727 CPTPQ5TA50 214 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 B3GNT6Q6ZMB0 384 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 CPEB2Q7Z5Q1 589 aaKnown RBP18.03■□□□□ 0.48
CCM2-216ENST00000488727 CLEC4FQ8N1N0 589 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 RBM4BQ9BQ04 359 aaKnown RBP18.03■□□□□ 0.48
CCM2-216ENST00000488727 WDR77Q9BQA1 342 aaPredicted RBP18.03■□□□□ 0.48
CCM2-216ENST00000488727 RBM4Q9BWF3 364 aaKnown RBP18.03■□□□□ 0.48
CCM2-216ENST00000488727 CORO2BQ9UQ03 480 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 CEPT1Q9Y6K0 416 aa18.03■□□□□ 0.48
CCM2-216ENST00000488727 DSPP15924 2871 aaKnown RBP18.02■□□□□ 0.48
CCM2-216ENST00000488727 MED13Q9UHV7 2174 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms