RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 C21orf59P57076 290 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 IGLV3-21P80748 117 aaPredicted RBP6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 ALDH6A1Q02252 535 aaKnown RBP6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 COX10Q12887 443 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 DUSP8Q13202 625 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 MYO9BQ13459 2157 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 NEDD8Q15843 81 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 DEFB110Q30KQ9 67 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 TCTE1Q5JU00 501 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 ENTPD8Q5MY95 495 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 GPR107Q5VW38 600 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 TYW3Q6IPR3 259 aaKnown RBP6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 C1orf94Q6P1W5 598 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 PGBD2Q6P3X8 592 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 FRRS1Q6ZNA5 592 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 DGAT2L6Q6ZPD8 337 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 MED25Q71SY5 747 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 WDR53Q7Z5U6 358 aaPredicted RBP6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 ZER1Q7Z7L7 766 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 HMGN2P46Q86SG4 172 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 VRK2Q86Y07 508 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 ZNF595Q8IYB9 648 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 CARFQ8N187 725 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 DEPDC4Q8N2C3 294 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 CLIP4Q8N3C7 705 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 CDRT4Q8N9R6 151 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 OR6C4Q8NGE1 309 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 FAR1Q8WVX9 515 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 SLC9A6Q92581 669 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 CDS1Q92903 461 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 C12orf43Q96C57 262 aaKnown RBP6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 ISOC1Q96CN7 298 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 ZDHHC12Q96GR4 267 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 MPP4Q96JB8 637 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 PRRC1Q96M27 445 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 TGM7Q96PF1 710 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 CD180Q99467 661 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 STACQ99469 402 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 IER2Q9BTL4 223 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 PRR14Q9BWN1 585 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 SPRTNQ9H040 489 aaPredicted RBP6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 QRSL1Q9H0R6 528 aaKnown RBP6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 PDE7BQ9NP56 450 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 CCNB1IP1Q9NPC3 277 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 PRDM6Q9NQX0 595 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 DUSP22Q9NRW4 184 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 FKBP14Q9NWM8 211 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 TMEM9Q9P0T7 183 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 SEMA5BQ9P283 1151 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 LRIT1Q9P2V4 623 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 NDOR1Q9UHB4 597 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 PSORS1C1Q9UIG5 152 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 MKLN1Q9UL63 735 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 CDC14AQ9UNH5 594 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 SATB2Q9UPW6 733 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 CLCA2Q9UQC9 943 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 GPR55Q9Y2T6 319 aaPredicted RBP6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 IFT52Q9Y366 437 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 REV3LO60673 3130 aa6.29□□□□□ -1.4
RN7SL561P-201ENST00000488553 LAMA3Q16787 3333 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 IGHV1OR21-1A0A087WYE8 117 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 CLCA1A8K7I4 914 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 ZNF99A8MXY4 864 aaPredicted RBP6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 H3BMH7 237 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 H3BMQ9 156 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 TGFBR3LH3BV60 316 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 CLDN4O14493 209 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 HRO43593 1189 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 RGS10O43665 173 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 NUDT21O43809 227 aaKnown RBP6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 OR10H3O60404 316 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 MPZL2O60487 215 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 SDC3O75056 442 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 FAM20BO75063 409 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 STX11O75558 287 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 UGT2B17O75795 530 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 CYP7B1O75881 506 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 INMTO95050 263 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 NKX2-2O95096 273 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 ZBTB11O95625 1053 aaPredicted RBP6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 CBX7O95931 251 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 AK1P00568 194 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 THBS1P07996 1170 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 CCNYL3P0C7X3 344 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 RPS4Y1P22090 263 aaKnown RBP6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 ALDH4A1P30038 563 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 GALNSP34059 522 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 KRT20P35900 424 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 PEX19P40855 299 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 GP2P55259 537 aaKnown RBP6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 GFERP55789 205 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 OR1D5P58170 312 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 CDC42P60953 191 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 SNRPGP62308 76 aaKnown RBP6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 SKP1P63208 163 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 EEF1A1P68104 462 aaKnown RBP6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 BNC1Q01954 994 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 CFHR1Q03591 330 aa6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 FOXD4Q12950 439 aaPredicted RBP6.28□□□□□ -1.4
RN7SL561P-201ENST00000488553 BNIP3Q12983 259 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms