RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 HAS2Q92819 552 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 PLEKHF1Q96S99 279 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 NAPBQ9H115 298 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 SLC26A1Q9H2B4 701 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 Q9H3A6 140 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 IL1RAPL2Q9NP60 686 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 TRIOBPQ9H2D6 2365 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 NPIPA5A0A0B4J1W7 369 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 FAM170AA1A519 330 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 NPIPA5E9PKD4 350 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 CACNB4O00305 520 aaPredicted RBP2.28□□□□□ -2.04
CCDC66-221ENST00000487739 OR7A17O14581 309 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 TXNDC12O95881 172 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 GAS8O95995 478 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 PGK1P00558 417 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 TRIM23P36406 574 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 GK2Q14410 553 aaPredicted RBP2.28□□□□□ -2.04
CCDC66-221ENST00000487739 AARDQ4LEZ3 155 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 ZNF691Q5VV52 312 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 RTL6Q6ICC9 239 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 MCOLN2Q8IZK6 566 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 NAT8LQ8N9F0 302 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 LPCAT1Q8NF37 534 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 BBS1Q8NFJ9 593 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 OR4L1Q8NH43 312 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 FNDC8Q8TC99 324 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 BCL2L2Q92843 193 aaPredicted RBP2.28□□□□□ -2.04
CCDC66-221ENST00000487739 DHTKD1Q96HY7 919 aaPredicted RBP2.28□□□□□ -2.04
CCDC66-221ENST00000487739 CXorf58Q96LI9 332 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 CPXM1Q96SM3 734 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 AKIRIN1Q9H9L7 192 aaPredicted RBP2.28□□□□□ -2.04
CCDC66-221ENST00000487739 ARGLU1Q9NWB6 273 aaPredicted RBP2.28□□□□□ -2.04
CCDC66-221ENST00000487739 TRPC4Q9UBN4 977 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 FBXW2Q9UKT8 454 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 DIMT1Q9UNQ2 313 aaKnown RBP2.28□□□□□ -2.04
CCDC66-221ENST00000487739 ZNF175Q9Y473 711 aa2.28□□□□□ -2.04
CCDC66-221ENST00000487739 LRRK1Q38SD2 2015 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 ASTN1O14525 1302 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 HTATSF1O43719 755 aaKnown RBP2.27□□□□□ -2.05
CCDC66-221ENST00000487739 MMP23AO75900 390 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 GOSR1O95249 250 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 HPNP05981 417 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 GHRP10912 638 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 TOP1P11387 765 aaKnown RBP2.27□□□□□ -2.05
CCDC66-221ENST00000487739 GABRR1P24046 479 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 METAP1P53582 386 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 UCP2P55851 309 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 C16orf72Q14CZ0 275 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 STXBP2Q15833 593 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 EPC2Q52LR7 807 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 TCHHL1Q5QJ38 904 aaPredicted RBP2.27□□□□□ -2.05
CCDC66-221ENST00000487739 CD164L2Q6UWJ8 174 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 ASRGL1Q7L266 308 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 PRSS42Q7Z5A4 293 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 SERPINA12Q8IW75 414 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 STHQ8IWL8 128 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 C10orf53Q8N6V4 93 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 ZNF540Q8NDQ6 660 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 OR10H4Q8NGA5 316 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 MRPL53Q96EL3 112 aaKnown RBP2.27□□□□□ -2.05
CCDC66-221ENST00000487739 TSSK1BQ9BXA7 367 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 MRPL9Q9BYD2 267 aaKnown RBP2.27□□□□□ -2.05
CCDC66-221ENST00000487739 TSPY26PQ9H489 355 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 MAGEF1Q9HAY2 307 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 NRN1Q9NPD7 142 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 DDX28Q9NUL7 540 aaKnown RBP2.27□□□□□ -2.05
CCDC66-221ENST00000487739 GTF3C1Q12789 2109 aa2.27□□□□□ -2.05
CCDC66-221ENST00000487739 GAKO14976 1311 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 KIF7Q2M1P5 1343 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 C11orf98E9PRG8 122 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 KINO60870 393 aaKnown RBP2.26□□□□□ -2.05
CCDC66-221ENST00000487739 NOL4O94818 638 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 ZNF44P15621 663 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 HNRNPA2B1P22626 353 aaKnown RBP2.26□□□□□ -2.05
CCDC66-221ENST00000487739 STIP1P31948 543 aaKnown RBP2.26□□□□□ -2.05
CCDC66-221ENST00000487739 KIAA1024LP59773 190 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 HAND2P61296 217 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 RPS4XP62701 263 aaKnown RBP2.26□□□□□ -2.05
CCDC66-221ENST00000487739 HERV-K104P63124 156 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 PDE7AQ13946 482 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 STX1AQ16623 288 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 FUT11Q495W5 492 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 OR4A16Q8NH70 328 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 KRT35Q92764 455 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 C5orf30Q96GV9 206 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 FOXA2Q9Y261 457 aaPredicted RBP2.26□□□□□ -2.05
CCDC66-221ENST00000487739 RPH3AQ9Y2J0 694 aaPredicted RBP2.26□□□□□ -2.05
CCDC66-221ENST00000487739 SNX5Q9Y5X3 404 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 CHD4Q14839 1912 aa2.26□□□□□ -2.05
CCDC66-221ENST00000487739 A0A1B0GUA9 196 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 EI24O14681 340 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 SH2D1BO14796 132 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 SNAI2O43623 268 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 CYP11B1P15538 503 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 CYP3A5P20815 502 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 RBMXP38159 391 aaKnown RBP2.25□□□□□ -2.05
CCDC66-221ENST00000487739 GEMP55040 296 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 PFN3P60673 137 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 MORF4L2Q15014 288 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 HKDC1Q2TB90 917 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms