RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ZNF414Q96IQ9 312 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 C1orf147Q96MC9 270 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 OR5M11Q96RB7 305 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 MCCC1Q96RQ3 725 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 NFKBIZQ9BYH8 718 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 RWDD1Q9H446 243 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 ROPN1Q9HAT0 212 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 DCAF13Q9NV06 445 aaKnown RBP2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 DUS2Q9NX74 493 aaKnown RBP2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 GALPQ9UBC7 116 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 GHRLQ9UBU3 117 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 IL20RAQ9UHF4 553 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 NTNG1Q9Y2I2 539 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 NPC1L1Q9UHC9 1359 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 TRAV9-2A0A087WT02 112 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 TTC26A0AVF1 554 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 E9PMD0 336 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 SGK494L7N484 410 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 PDLIM1O00151 329 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 E2F3O00716 465 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 TOM1L1O75674 476 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 IGSF6O95976 241 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 PRDX6P30041 224 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 CHRNA3P32297 505 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 RFC2P35250 354 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 PRELPP51888 382 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 ARHGDIBP52566 201 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 RAG2P55895 527 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 GABPB1Q06547 395 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 KARSQ15046 597 aaKnown RBP2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZIC1Q15915 447 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 TPD52L1Q16890 204 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 SLC22A6Q4U2R8 563 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 CYBRD1Q53TN4 286 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 MS4A13Q5J8X5 152 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 ATAD3CQ5T2N8 411 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 RSBN1Q5VWQ0 802 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZNF774Q6NX45 483 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 ARSKQ6UWY0 536 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 C2orf66Q6UXQ4 117 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZNF600Q6ZNG1 722 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 NET1Q7Z628 596 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZSCAN30Q86W11 494 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 AMZ2Q86W34 360 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 CADM2Q8N3J6 435 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 OR6T1Q8NGN1 323 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZNF671Q8TAW3 534 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 CCDC51Q96ER9 411 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 FICDQ9BVA6 458 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 ADGRL4Q9HBW9 690 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 VAT1LQ9HCJ6 419 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 NGBQ9NPG2 151 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 CNOT2Q9NZN8 540 aaKnown RBP2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 ARMCX1Q9P291 453 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 ATP6V1HQ9UI12 483 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 MGAT4BQ9UQ53 548 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 CHMP2BQ9UQN3 213 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 NUDCQ9Y266 331 aa2.93□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZSCAN5CA6NGD5 496 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 ANKRD30BLA7E2S9 258 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 ALOX15BO15296 676 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 TRIM16O95361 564 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 OAS1P00973 400 aaKnown RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 IGFBP1P08833 259 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 ANXA4P09525 319 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 GSTT2P0CG29 244 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 GSTT2BP0CG30 244 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 UQCRBP14927 111 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 SDC1P18827 310 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 CCNA2P20248 432 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 PTMSP20962 102 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 AXLP30530 894 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 MAT2AP31153 395 aaKnown RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 TRIM23P36406 574 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 STK19P49842 368 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 IST1P53990 364 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 MRPS6P82932 125 aaKnown RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 IL1RL1Q01638 556 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 HSF2Q03933 536 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZP4Q12836 540 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 SCGB2A2Q13296 93 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 RAB35Q15286 201 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 Q1RN00 199 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 C17orf58Q2M2W7 97 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZNF528Q3MIS6 628 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 LRIT3Q3SXY7 679 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 TIMM50Q3ZCQ8 353 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 LDLRAP1Q5SW96 308 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 LGSNQ5TDP6 509 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 LRRC8BQ6P9F7 803 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 C1orf186Q6ZWK4 172 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 MCOLN2Q8IZK6 566 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZNF491Q8N8L2 437 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 DLX4Q92988 240 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 RAB3CQ96E17 227 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 SDSLQ96GA7 329 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 SERAC1Q96JX3 654 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 HSD3B7Q9H2F3 369 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 KAT8Q9H7Z6 458 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms