RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 DGAT2Q96PD7 388 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 GFM1Q96RP9 751 aaKnown RBP8.8□□□□□ -1
SF3B1-211ENST00000487698 MBOAT4Q96T53 435 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 PIP5K1AQ99755 562 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 WFDC6Q9BQY6 131 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 LMF2Q9BU23 707 aaKnown RBP8.8□□□□□ -1
SF3B1-211ENST00000487698 ZNF350Q9GZX5 532 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 ACAD8Q9UKU7 415 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 TESMINQ9Y4I5 508 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 J3KTA2 159 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 HRKO00198 91 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 SYT5O00445 386 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 FFAR1O14842 300 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 NKX2-2O95096 273 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 LGI1O95970 557 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 CLPSP04118 112 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 ARHGDIAP52565 204 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 HMGA2P52926 109 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 HPCAP84074 193 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 FUT7Q11130 342 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 EPS8Q12929 822 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 KDM4DQ6B0I6 523 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 TCTN3Q6NUS6 607 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 COX15Q7KZN9 410 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 CYP4Z1Q86W10 505 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 LACC1Q8IV20 430 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 FBXL20Q96IG2 436 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 DHRS1Q96LJ7 313 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 VSTM2LQ96N03 204 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 OR6C1Q96RD1 312 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 SDF2Q99470 211 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 PINK1Q9BXM7 581 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 SAP130Q9H0E3 1048 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 QRSL1Q9H0R6 528 aaKnown RBP8.79□□□□□ -1
SF3B1-211ENST00000487698 SYNDIG1Q9H7V2 258 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 C11orf16Q9NQ32 467 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 ACER3Q9NUN7 267 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 HCN4Q9Y3Q4 1203 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 CHST2Q9Y4C5 530 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 R4GN57 208 aa8.79□□□□□ -1
SF3B1-211ENST00000487698 PRAMEF2O60811 474 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 TIAF1O95411 115 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 AK1P00568 194 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 ALBP02768 609 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 ALPPP05187 535 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 GP1BAP07359 652 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 FUT4P22083 530 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 RPS4Y1P22090 263 aaKnown RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 ACP1P24666 158 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 PRKAR1BP31321 381 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 SSTR4P31391 388 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 RORAP35398 523 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 YAP1P46937 504 aaKnown RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 DAPP51397 102 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 CDH12P55289 794 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 MYBPC1Q00872 1141 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 PSG6Q00889 435 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 SPIBQ01892 262 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 RHAGQ02094 409 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 ZNF155Q12901 538 aaPredicted RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 KIF26BQ2KJY2 2108 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 RFX4Q33E94 735 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 DCST2Q5T1A1 773 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 ARHGAP40Q5TG30 622 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 DHRS4L2Q6PKH6 230 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 HMGN2P46Q86SG4 172 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 RBM45Q8IUH3 476 aaKnown RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 COX18Q8N8Q8 333 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 SLC38A9Q8NBW4 561 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 CYGBQ8WWM9 190 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 PIK3R3Q92569 461 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 ZG16BQ96DA0 208 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 CNDP2Q96KP4 475 aaKnown RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 PTCHD1Q96NR3 888 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 PSD2Q9BQI7 771 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 TOR3AQ9H497 397 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 SOX17Q9H6I2 414 aaPredicted RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 FOLH1BQ9HBA9 442 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 MKKSQ9NPJ1 570 aaPredicted RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 SLC22A11Q9NSA0 550 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 PDP1Q9P0J1 537 aaPredicted RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 WDR45Q9Y484 360 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 HEMK1Q9Y5R4 338 aaPredicted RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 IGLV3-12A0A075B6K2 115 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 TCRBV16S1A1N1A0A5B0 115 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 EIF4E1BA6NMX2 242 aaKnown RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 TNFRSF11BO00300 401 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 FLRT2O43155 660 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 HS6ST1O60243 411 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 KIAA0513O60268 411 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 SOX30O94993 753 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 GUSBP08236 651 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 IGFBP5P24593 272 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 ZFP36L1Q07352 338 aaKnown RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 TRA2AQ13595 282 aaKnown RBP eCLIP8.78□□□□□ -11e-8■□□□□ 10.4
SF3B1-211ENST00000487698 ZNF267Q14586 743 aaPredicted RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 EXOC3L2Q2M3D2 409 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 ZIK1Q3SY52 487 aaPredicted RBP8.78□□□□□ -1
SF3B1-211ENST00000487698 ZNF311Q5JNZ3 666 aa8.78□□□□□ -1
SF3B1-211ENST00000487698 CCNJQ5T5M9 372 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms