RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 SLC35A4Q96G79 324 aa11.34□□□□□ -0.59
SREBF1-215ENST00000487401 BTBD9Q96Q07 612 aa11.34□□□□□ -0.59
SREBF1-215ENST00000487401 KCNA7Q96RP8 456 aa11.34□□□□□ -0.59
SREBF1-215ENST00000487401 POLDIP3Q9BY77 421 aaKnown RBP11.34□□□□□ -0.59
SREBF1-215ENST00000487401 TXLNGYQ9BZA5 131 aa11.34□□□□□ -0.59
SREBF1-215ENST00000487401 SHCBP1LQ9BZQ2 653 aa11.34□□□□□ -0.59
SREBF1-215ENST00000487401 STMN4Q9H169 189 aaPredicted RBP11.34□□□□□ -0.59
SREBF1-215ENST00000487401 GSTO2Q9H4Y5 243 aa11.34□□□□□ -0.59
SREBF1-215ENST00000487401 FOLH1BQ9HBA9 442 aa11.34□□□□□ -0.59
SREBF1-215ENST00000487401 TAS2R10Q9NYW0 307 aa11.34□□□□□ -0.59
SREBF1-215ENST00000487401 TAS2R9Q9NYW1 312 aa11.34□□□□□ -0.59
SREBF1-215ENST00000487401 CRIM1Q9NZV1 1036 aa11.34□□□□□ -0.59
SREBF1-215ENST00000487401 FOXD3Q9UJU5 478 aaPredicted RBP11.34□□□□□ -0.59
SREBF1-215ENST00000487401 OR10H1Q9Y4A9 318 aa11.34□□□□□ -0.59
SREBF1-215ENST00000487401 POLQO75417 2590 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 PKDREJQ9NTG1 2253 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 A0A1W2PPM1 405 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 EEF1E1-BLOC1S5C9J1V9 151 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 H0Y3Z8 333 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 H3BQF6 201 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 EEF1E1O43324 174 aaKnown RBP11.33□□□□□ -0.6
SREBF1-215ENST00000487401 PLOD3O60568 738 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 COQ9O75208 318 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 GLRA3O75311 464 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 NME6O75414 186 aaPredicted RBP11.33□□□□□ -0.6
SREBF1-215ENST00000487401 CTAG2O75638 210 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 CT45A8P0DMV1 189 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 CT45A9P0DMV2 189 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 CPN1P15169 458 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 DNAJA1P31689 397 aaKnown RBP11.33□□□□□ -0.6
SREBF1-215ENST00000487401 CCT5P48643 541 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 NCBP2P52298 156 aaKnown RBP eCLIP11.33□□□□□ -0.6
SREBF1-215ENST00000487401 AGFG1P52594 562 aaKnown RBP11.33□□□□□ -0.6
SREBF1-215ENST00000487401 ZNF136P52737 540 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 DGKQP52824 942 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 ART1P52961 327 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 CORO7P57737 925 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 ZNF155Q12901 538 aaPredicted RBP11.33□□□□□ -0.6
SREBF1-215ENST00000487401 FBXL19-AS1Q494R0 122 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 CCDC153Q494R4 210 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 CT45A2Q5DJT8 189 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 AAGABQ6PD74 315 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 TRIM42Q8IWZ5 723 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 OR4K17Q8NGC6 315 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 VSTM2LQ96N03 204 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 SH3GL2Q99962 352 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 OR2B2Q9GZK3 357 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 MIEF1Q9NQG6 463 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 SIRT5Q9NXA8 310 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 DKKL1Q9UK85 242 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 EDARQ9UNE0 448 aa11.33□□□□□ -0.6
SREBF1-215ENST00000487401 WBP11Q9Y2W2 641 aaKnown RBP11.33□□□□□ -0.6
SREBF1-215ENST00000487401 PCNX1Q96RV3 2341 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 MBD3L4A6NDZ8 208 aaPredicted RBP11.32□□□□□ -0.6
SREBF1-215ENST00000487401 MBD3L3A6NE82 208 aaPredicted RBP11.32□□□□□ -0.6
SREBF1-215ENST00000487401 MBD3L5A6NJ08 208 aaPredicted RBP11.32□□□□□ -0.6
SREBF1-215ENST00000487401 MYO1GB0I1T2 1018 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 G3V2L1 256 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 UBFD1O14562 309 aaKnown RBP11.32□□□□□ -0.6
SREBF1-215ENST00000487401 TSPAN2O60636 221 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 IL18BPO95998 194 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 PROCP04070 461 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 JUNP05412 331 aaKnown RBP11.32□□□□□ -0.6
SREBF1-215ENST00000487401 TMIGD3P0DMS9 266 aaPredicted RBP11.32□□□□□ -0.6
SREBF1-215ENST00000487401 NTSP30990 170 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 SRD5A2P31213 254 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 SLCO1A2P46721 670 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 PNLIPRP2P54317 469 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 FOXA1P55317 472 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 DNAJB13P59910 316 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 ZNF763Q0D2J5 394 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 CEBPEQ15744 281 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 FLYWCH1Q4VC44 716 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 FBXW10Q5XX13 1052 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 OR5M10Q6IEU7 315 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 POMZP3Q6PJE2 187 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 NPSR1Q6W5P4 371 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 TRIM46Q7Z4K8 759 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 MTERF4Q7Z6M4 381 aaKnown RBP11.32□□□□□ -0.6
SREBF1-215ENST00000487401 IFNEQ86WN2 208 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 C9orf106Q8NAJ2 232 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 OR7G2Q8NG99 324 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 GOT1L1Q8NHS2 421 aaPredicted RBP11.32□□□□□ -0.6
SREBF1-215ENST00000487401 MBD3L2Q8NHZ7 208 aaPredicted RBP11.32□□□□□ -0.6
SREBF1-215ENST00000487401 FAM76AQ8TAV0 307 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 MZB1Q8WU39 189 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 UBLCP1Q8WVY7 318 aaPredicted RBP11.32□□□□□ -0.6
SREBF1-215ENST00000487401 NRGNQ92686 78 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 SFXN2Q96NB2 322 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 TM9SF2Q99805 663 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 TUBA1CQ9BQE3 449 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 GPATCH1Q9BRR8 931 aaKnown RBP11.32□□□□□ -0.6
SREBF1-215ENST00000487401 CLEC4MQ9H2X3 399 aaPredicted RBP11.32□□□□□ -0.6
SREBF1-215ENST00000487401 RASSF1Q9NS23 344 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 FBXL2Q9UKC9 423 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 EMCNQ9ULC0 261 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 GRID1Q9ULK0 1009 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 WIF1Q9Y5W5 379 aa11.32□□□□□ -0.6
SREBF1-215ENST00000487401 TUBAL3A6NHL2 446 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 A6NNC1 897 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms