RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 NT5CQ8TCD5 201 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 TMCO6Q96DC7 493 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 ZNF582Q96NG8 517 aaPredicted RBP24.51■■□□□ 1.51
HLA-C-208ENST00000487245 LIPT1Q9Y234 373 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 TLX2O43763 284 aaPredicted RBP24.51■■□□□ 1.51
HLA-C-208ENST00000487245 HOXB3P14651 431 aaPredicted RBP24.51■■□□□ 1.51
HLA-C-208ENST00000487245 CPEP16870 476 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 COL9A1P20849 921 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 SMSP52788 366 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 GAS1P54826 345 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 PPP2CBP62714 309 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 PPP2CAP67775 309 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 BNC1Q01954 994 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 C18orf63Q68DL7 685 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 IQCF1Q8N6M8 205 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 OR1E3Q8WZA6 343 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 WDR92Q96MX6 357 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 KLF15Q9UIH9 416 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 RAB8AP61006 207 aa24.5■■□□□ 1.51
HLA-C-208ENST00000487245 KCNJ8Q15842 424 aa24.5■■□□□ 1.51
HLA-C-208ENST00000487245 LRIT3Q3SXY7 679 aa24.5■■□□□ 1.51
HLA-C-208ENST00000487245 GPAT3Q53EU6 434 aa24.5■■□□□ 1.51
HLA-C-208ENST00000487245 IQCHQ86VS3 1027 aa24.5■■□□□ 1.51
HLA-C-208ENST00000487245 GJD3Q8N144 294 aa24.5■■□□□ 1.51
HLA-C-208ENST00000487245 MCOLN1Q9GZU1 580 aa24.5■■□□□ 1.51
HLA-C-208ENST00000487245 S1PR5Q9H228 398 aa24.5■■□□□ 1.51
HLA-C-208ENST00000487245 POM121BA6NF01 834 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 STK25O00506 426 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 DYRK3O43781 588 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 IL1AP01583 271 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 CASP3P42574 277 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 ACSM5Q6NUN0 579 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 TMEM107Q6UX40 140 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 SAMD14Q8IZD0 417 aaPredicted RBP24.49■■□□□ 1.51
HLA-C-208ENST00000487245 NUP43Q8NFH3 380 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 IL17RDQ8NFM7 739 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 GNPDA2Q8TDQ7 276 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 ASB15Q8WXK1 588 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 TRMT61AQ96FX7 289 aaKnown RBP24.49■■□□□ 1.51
HLA-C-208ENST00000487245 ARHGDIGQ99819 225 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 PSPHP78330 225 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 BTN3A2P78410 334 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 KIR2DS3Q14952 304 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 RAB30Q15771 203 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 BCDIN3DQ7Z5W3 292 aaKnown RBP24.49■■□□□ 1.51
HLA-C-208ENST00000487245 ASPGQ86U10 573 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 FAM181AQ8N9Y4 354 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 TMEM163Q8TC26 289 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 ELP4Q96EB1 424 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 ZNF681Q96N22 645 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 OR7D2Q96RA2 312 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 YIPF4Q9BSR8 244 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 SRMSQ9H3Y6 488 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 ANKRD19PQ9H560 264 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 TRIM45Q9H8W5 580 aaPredicted RBP24.49■■□□□ 1.51
HLA-C-208ENST00000487245 V9GYH0 126 aa24.49■■□□□ 1.51
HLA-C-208ENST00000487245 CHD9Q3L8U1 2897 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 TMEM129A0AVI4 362 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 TNFRSF10CO14798 259 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 NR2F6P10588 404 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 IFNGR2P38484 337 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 DUSP2Q05923 314 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 RAB40BQ12829 278 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 BCL2A1Q16548 175 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 CLDN22Q8N7P3 220 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 LRR1Q96L50 414 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 OR2A14Q96R47 310 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 GPA33Q99795 319 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 SLC28A3Q9HAS3 691 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 GRIP1Q9Y3R0 1128 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 PCDHGB2Q9Y5G2 931 aa24.48■■□□□ 1.51
HLA-C-208ENST00000487245 TICRRQ7Z2Z1 1910 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 HTR3EA5X5Y0 456 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 SNTNA6NMZ2 147 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 H3BQ06 376 aaPredicted RBP24.47■■□□□ 1.51
HLA-C-208ENST00000487245 SCAMP1O15126 338 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 EGFP01133 1207 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 ACP2P11117 423 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 CTHP32929 405 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 BUD31P41223 144 aaPredicted RBP24.47■■□□□ 1.51
HLA-C-208ENST00000487245 CLDN2P57739 230 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 RUNX1T1Q06455 604 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 ADAM15Q13444 863 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 LARS2Q15031 903 aaKnown RBP24.47■■□□□ 1.51
HLA-C-208ENST00000487245 ZNF750Q32MQ0 723 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 TMPRSS11AQ6ZMR5 421 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 KIF18BQ86Y91 864 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 MED18Q9BUE0 208 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 PHF11Q9UIL8 331 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 SLC13A4Q9UKG4 626 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 TBC1D24Q9ULP9 559 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.47■■□□□ 1.51
HLA-C-208ENST00000487245 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.47■■□□□ 1.51
HLA-C-208ENST00000487245 RFXAPO00287 272 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 PRODHO43272 600 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 C8orf89P0DMQ9 161 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 ETV5P41161 510 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 ETV1P50549 477 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 PAQR6Q6TCH4 344 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 SLC36A4Q6YBV0 504 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms