RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TTC19Q6DKK2 380 aaPredicted RBP17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 OR5M10Q6IEU7 315 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 OR2A2Q6IF42 318 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 FAM180BQ6P0A1 224 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 C20orf204Q6ZNR8 217 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 COMMD6Q7Z4G1 85 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 BTLAQ7Z6A9 289 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 CCDC91Q7Z6B0 441 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 TRPC4APQ8TEL6 797 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 KLHL29Q96CT2 875 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 SLC35A4Q96G79 324 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 MARK4Q96L34 752 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 GPR78Q96P69 363 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 PIGQQ9BRB3 760 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 LRRC1Q9BTT6 524 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 OPN3Q9H1Y3 402 aaPredicted RBP17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 HEY2Q9UBP5 337 aa17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 GPR55Q9Y2T6 319 aaPredicted RBP17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 MRPS18CQ9Y3D5 142 aaKnown RBP17.58■□□□□ 0.4
SMPDL3A-202ENST00000487215 HMX2A2RU54 273 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 SLC22A20A6NK97 555 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 ZIC3O60481 467 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 GUCY1B2O75343 617 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 REM1O75628 298 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 KLHL2O95198 593 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 LOXP28300 417 aaPredicted RBP17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 UGT2B10P36537 528 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 CCNG1P51959 295 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 B3GALT5-AS1P59052 145 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 CAV1Q03135 178 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 TRAF3Q13114 568 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 BCL2A1Q16548 175 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 C10orf62Q5T681 223 aaPredicted RBP17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 MROH9Q5TGP6 573 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 CXXC5Q7LFL8 322 aaKnown RBP17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 ZNF550Q7Z398 422 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 PTGR2Q8N8N7 351 aaPredicted RBP17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 DTNBP1Q96EV8 351 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 CNRIP1Q96F85 164 aaPredicted RBP17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 PGM2Q96G03 612 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 ADOQ96SZ5 270 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 TRPS1Q9UHF7 1281 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 ADAM21Q9UKJ8 722 aa17.57■□□□□ 0.4
SMPDL3A-202ENST00000487215 A0A096LPK6 155 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 ABCB7O75027 752 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 POU2F1P14859 743 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 GRK2P25098 689 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 DPP4P27487 766 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 KIR2DL2P43627 348 aaPredicted RBP17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 SIRPAP78324 504 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 GALNT1Q10472 559 aaPredicted RBP17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 IFT88Q13099 833 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 SGO1Q5FBB7 561 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 TECRLQ5HYJ1 363 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 KLC3Q6P597 504 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 CHMP1BQ7LBR1 199 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 CCDC25Q86WR0 208 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 UBQLNLQ8IYU4 475 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 SPATA3Q8NHX4 192 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 RNF138Q8WVD3 245 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 FIG4Q92562 907 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 TM4SF18Q96CE8 201 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 ZNF681Q96N22 645 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 BTBD9Q96Q07 612 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 NTMT1Q9BV86 223 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 REPIN1Q9BWE0 567 aaKnown RBP17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 GSX2Q9BZM3 304 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 ZBTB26Q9HCK0 441 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 ELOVL5Q9NYP7 299 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 SLC12A4Q9UP95 1085 aa17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 UTP11Q9Y3A2 253 aaKnown RBP17.56■□□□□ 0.4
SMPDL3A-202ENST00000487215 C17orf51A8MQB3 221 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 RAD51CO43502 376 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 TSPAN2O60636 221 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 NME6O75414 186 aaPredicted RBP17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 CNOT4O95628 575 aaKnown RBP17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 MAGEA4P43358 317 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 PTH2RP49190 550 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 GAS1P54826 345 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 GBP7Q8N8V2 638 aaPredicted RBP17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 SPATA4Q8NEY3 305 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 MRRFQ96E11 262 aaKnown RBP17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 PHF21BQ96EK2 531 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 ZC3HAV1LQ96H79 300 aaKnown RBP17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 NSUN5Q96P11 429 aaKnown RBP17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 SLC39A3Q9BRY0 314 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 ELOVL6Q9H5J4 265 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 ANKRA2Q9H9E1 313 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 FARSBQ9NSD9 589 aaKnown RBP17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 PCTPQ9UKL6 214 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 PSME2Q9UL46 239 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 ARID1AO14497 2285 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 RAI1Q7Z5J4 1906 aaPredicted RBP17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 HIVEP2P31629 2446 aa17.55■□□□□ 0.4
SMPDL3A-202ENST00000487215 C16orf97H3BN30 126 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 CGAP01215 116 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 CT45A8P0DMV1 189 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 CT45A9P0DMV2 189 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 PEPDP12955 493 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 ALDH9A1P49189 494 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms