RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 PIGUQ9H490 435 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 MTHFD2LQ9H903 347 aaPredicted RBP6.58□□□□□ -1.36
SF3A3-206ENST00000487062 CXorf21Q9HAI6 301 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 MKKSQ9NPJ1 570 aaPredicted RBP6.58□□□□□ -1.36
SF3A3-206ENST00000487062 BATF3Q9NR55 127 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 KLHL28Q9NXS3 571 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 KIF17Q9P2E2 1029 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 DHCR7Q9UBM7 475 aaKnown RBP6.58□□□□□ -1.36
SF3A3-206ENST00000487062 SCOCQ9UIL1 159 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 C3orf18Q9UK00 162 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF232Q9UNY5 417 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 SATB2Q9UPW6 733 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 IFT52Q9Y366 437 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 SH3GLB1Q9Y371 365 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 HRH3Q9Y5N1 445 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 MAU2Q9Y6X3 613 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 ENPP4Q9Y6X5 453 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 PRAMEF27A3QJZ7 478 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 VGLL3A8MV65 326 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 A8MVJ9 347 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 SYT5O00445 386 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 PRAMEF2O60811 474 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 STX11O75558 287 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 CDC123O75794 336 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-206ENST00000487062 DIRAS1O95057 198 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 NKX2-2O95096 273 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 GADD45GO95257 159 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 ALPLP05186 524 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 CHRM4P08173 479 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 CT62P0C5K7 136 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 SPTBP11277 2137 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 ANXA8P13928 327 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 RRM2P31350 389 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 IFNA8P32881 189 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 CSTF2P33240 577 aaKnown RBP eCLIP6.57□□□□□ -1.36
SF3A3-206ENST00000487062 CAPGP40121 348 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 OR1D4P47884 311 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 OR1E2P47887 323 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 CHN2P52757 468 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 IST1P53990 364 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 BTG2P78543 158 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 PPP2R2BQ00005 443 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 SPIBQ01892 262 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 FUT5Q11128 374 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 ERV3-1Q14264 604 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF267Q14586 743 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-206ENST00000487062 EXOSC7Q15024 291 aaKnown RBP6.57□□□□□ -1.36
SF3A3-206ENST00000487062 LARS2Q15031 903 aaKnown RBP6.57□□□□□ -1.36
SF3A3-206ENST00000487062 DUSP5Q16690 384 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 DUSP7Q16829 419 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 SLC36A3Q495N2 470 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 IQCCQ4KMZ1 466 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 EIPR1Q53HC9 387 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF311Q5JNZ3 666 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 EXOSC6Q5RKV6 272 aaKnown RBP6.57□□□□□ -1.36
SF3A3-206ENST00000487062 DCST2Q5T1A1 773 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 PHF19Q5T6S3 580 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 MLIPQ5VWP3 458 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 TBPL2Q6SJ96 375 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 THSD4Q6ZMP0 1018 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 DBX2Q6ZNG2 339 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 PRR23CQ6ZRP0 262 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 TMEM179BQ7Z7N9 219 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 CARM1Q86X55 608 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 CHERPQ8IWX8 916 aaKnown RBP6.57□□□□□ -1.36
SF3A3-206ENST00000487062 PEX5LQ8IYB4 626 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 TAGAPQ8N103 731 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 OR7G1Q8NGA0 311 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 OR52R1Q8NGF1 315 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 RHBDD1Q8TEB9 315 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 GIPC3Q8TF64 312 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 TFAP2CQ92754 450 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 GATA6Q92908 595 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 OTUB1Q96FW1 271 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-206ENST00000487062 ART5Q96L15 291 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 OR6C1Q96RD1 312 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 PIP5K1AQ99755 562 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 LMF2Q9BU23 707 aaKnown RBP6.57□□□□□ -1.36
SF3A3-206ENST00000487062 ANKRD60Q9BZ19 345 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 AMBRA1Q9C0C7 1298 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 SLC38A1Q9H2H9 487 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 SMOC1Q9H4F8 434 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 ARMC7Q9H6L4 198 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 EVA1AQ9H8M9 152 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 ANKRA2Q9H9E1 313 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 FOLH1BQ9HBA9 442 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 POLE3Q9NRF9 147 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 LANCL2Q9NS86 450 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 NDUFAF4Q9P032 175 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 PDP1Q9P0J1 537 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-206ENST00000487062 AKAP7Q9P0M2 348 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-206ENST00000487062 FTSJ1Q9UET6 329 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 PRODH2Q9UF12 536 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 ENOPH1Q9UHY7 261 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 TMCC3Q9ULS5 477 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 CFL2Q9Y281 166 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 WDR45Q9Y484 360 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 TESMINQ9Y4I5 508 aa6.57□□□□□ -1.36
SF3A3-206ENST00000487062 TMEM184BQ9Y519 407 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-206ENST00000487062 HEMK1Q9Y5R4 338 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms