RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 TNFSF10P50591 281 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 CLCN4P51793 760 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 KCNK10P57789 538 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 NOP14P78316 857 aaKnown RBP3.56□□□□□ -1.84
PTCD3-216ENST00000487043 IRX4P78413 519 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 CUL2Q13617 745 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 CEACAM7Q14002 265 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 MTF1Q14872 753 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 P2RY6Q15077 328 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 INAQ16352 499 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 CARTPTQ16568 116 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 LRRC37A5PQ49AS3 106 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 FGD3Q5JSP0 725 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 SPOPLQ6IQ16 392 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 SLC27A4Q6P1M0 643 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 PSRC1Q6PGN9 363 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-216ENST00000487043 GDPD4Q6W3E5 623 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 ZNF571Q7Z3V5 609 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-216ENST00000487043 VPS36Q86VN1 386 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 ECHDC2Q86YB7 292 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 LRRC52Q8N7C0 313 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 TMEM99Q8N816 258 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 TCEANCQ8N8B7 351 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 SIDT2Q8NBJ9 832 aaKnown RBP3.56□□□□□ -1.84
PTCD3-216ENST00000487043 LEMD2Q8NC56 503 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 HPSE2Q8WWQ2 592 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 SHC3Q92529 594 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 TM9SF4Q92544 642 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 BPIFA2Q96DR5 249 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 SENP5Q96HI0 755 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-216ENST00000487043 HPDLQ96IR7 371 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 LPAR4Q99677 370 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 AGPAT1Q99943 283 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 SYT11Q9BT88 431 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 DPEP3Q9H4B8 488 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 HAUS4Q9H6D7 363 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 DCLRE1BQ9H816 532 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 CYP3A43Q9HB55 503 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 NGBQ9NPG2 151 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 SOHLH2Q9NX45 425 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 HACD3Q9P035 362 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 COPS7AQ9UBW8 275 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 FAM153AQ9UHL3 310 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 FBXL4Q9UKA2 621 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 TBX21Q9UL17 535 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 SATB2Q9UPW6 733 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 AURKCQ9UQB9 309 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 ERVK-19Q9WJR5 959 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 ETV7Q9Y603 341 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 CITO14578 2027 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 TRIP11Q15643 1979 aa3.56□□□□□ -1.84
PTCD3-216ENST00000487043 HTTP42858 3142 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 CEP350Q5VT06 3117 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 UMODL1Q5DID0 1318 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 ARL5CA6NH57 179 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 USP27XA6NNY8 438 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 KPNA7A9QM74 516 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 SSX5O60225 188 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 AKR7A3O95154 331 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 TIMP1P01033 207 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 PDGFBP01127 241 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-216ENST00000487043 GPIP06744 558 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 GSTA2P09210 222 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 PNMA6AP0CW24 399 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-216ENST00000487043 PRKAR1AP10644 381 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 GZMAP12544 262 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 CYP11B1P15538 503 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 AKT2P31751 481 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 STIP1P31948 543 aaKnown RBP3.55□□□□□ -1.84
PTCD3-216ENST00000487043 RPL9P32969 192 aaKnown RBP3.55□□□□□ -1.84
PTCD3-216ENST00000487043 RFC2P35250 354 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 MAGEA1P43355 309 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 ASMTP46597 345 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 TAF6P49848 677 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 CCL23P55773 120 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 DCDC1P59894 354 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 YWHAEP62258 255 aaKnown RBP3.55□□□□□ -1.84
PTCD3-216ENST00000487043 HERV-K104P63124 156 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 SPA17Q15506 151 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 SPHARQ15513 63 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 PTPN14Q15678 1187 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 CEBPEQ15744 281 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 LRRC26Q2I0M4 334 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 ZNF699Q32M78 642 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 ACCSLQ4AC99 568 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 HSP90AA5PQ58FG0 334 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 TAF3Q5VWG9 929 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 RAET1GQ6H3X3 334 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 TMEM64Q6YI46 380 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 ZNF771Q7L3S4 317 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-216ENST00000487043 FCRLAQ7L513 359 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 SLC26A9Q7LBE3 791 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 TRMT11Q7Z4G4 463 aaKnown RBP3.55□□□□□ -1.84
PTCD3-216ENST00000487043 TRPT1Q86TN4 253 aaKnown RBP3.55□□□□□ -1.84
PTCD3-216ENST00000487043 SLC47A2Q86VL8 602 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 ZNF677Q86XU0 584 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 OR13C5Q8NGS8 318 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 OR1L3Q8NH93 324 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 CCDC110Q8TBZ0 833 aa3.55□□□□□ -1.84
PTCD3-216ENST00000487043 APOBEC4Q8WW27 367 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms