RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 PSD4Q8NDX1 1056 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 COQ8BQ96D53 544 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 MTERF3Q96E29 417 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 VSTM2LQ96N03 204 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 DGAT2Q96PD7 388 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 BTBD9Q96Q07 612 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 SECISBP2Q96T21 854 aaKnown RBP5.26□□□□□ -1.57
CUX1-208ENST00000485792 FAIM2Q9BWQ8 316 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 OR10A5Q9H207 317 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 UBQLN3Q9H347 655 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 VIPAS39Q9H9C1 493 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 SLC35C2Q9NQQ7 365 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 AGPAT4Q9NRZ5 378 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.26□□□□□ -1.57
CUX1-208ENST00000485792 C1orf109Q9NX04 203 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 FLRT3Q9NZU0 649 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 CNOT11Q9UKZ1 510 aaKnown RBP5.26□□□□□ -1.57
CUX1-208ENST00000485792 PSME2Q9UL46 239 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 ERVK-19Q9WJR5 959 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 GPR55Q9Y2T6 319 aaPredicted RBP5.26□□□□□ -1.57
CUX1-208ENST00000485792 POLR3HQ9Y535 204 aaPredicted RBP5.26□□□□□ -1.57
CUX1-208ENST00000485792 ANKHD1Q8IWZ3 2542 aaKnown RBP5.26□□□□□ -1.57
CUX1-208ENST00000485792 ALPK2Q86TB3 2170 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 C2orf92A0A1B0GVN3 265 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 ANKUB1A6NFN9 424 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 GOLGA6L10A6NI86 522 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 F8W735 103 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 WWP2O00308 870 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 PIP5K1BO14986 540 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 ACOX3O15254 700 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 RGS14O43566 566 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 VPS4BO75351 444 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 TRIM3O75382 744 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 ERLIN1O75477 346 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 BCAS2O75934 225 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 RASAL1O95294 804 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 CLDN1O95832 211 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 IFNA16P05015 189 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 ABCB1P08183 1280 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 CCL3P10147 92 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 EFNA1P20827 205 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 CNR1P21554 472 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 GAS1P54826 345 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 KCNK10P57789 538 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 ABCE1P61221 599 aaKnown RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 DCAF7P61962 342 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 PSPHP78330 225 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 PHC1P78364 1004 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 PSG6Q00889 435 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 OCRLQ01968 901 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 EMX2Q04743 252 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 DOC2BQ14184 412 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 ZNF267Q14586 743 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 EXOSC7Q15024 291 aaKnown RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 POU4F3Q15319 338 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 NNATQ16517 81 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 EIF2S3LQ2VIR3 472 aaKnown RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 AGBL2Q5U5Z8 902 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 OGFOD2Q6N063 350 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 OPN5Q6U736 354 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 RNF111Q6ZNA4 994 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 RTL4Q6ZR62 310 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 Q6ZS46 218 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 RGS9BPQ6ZS82 235 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 LARP4Q71RC2 724 aaKnown RBP eCLIP5.25□□□□□ -1.57
CUX1-208ENST00000485792 WDR53Q7Z5U6 358 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 ZAR1Q86SH2 424 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 NUDCD3Q8IVD9 361 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 CYP4Z2PQ8N1L4 340 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 LRRC25Q8N386 305 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 FBXW8Q8N3Y1 598 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 FAM26EQ8N5C1 309 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 CPSF7Q8N684 471 aaKnown RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 ZNF781Q8N8C0 355 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 ACBD4Q8NC06 268 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 OR2M7Q8NG81 312 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 OR7G2Q8NG99 324 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 RAB3IL1Q8TBN0 382 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 AGR3Q8TD06 166 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 STK35Q8TDR2 534 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 TWIST2Q8WVJ9 160 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 HGDQ93099 445 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 SPACA9Q96E40 222 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 ELP4Q96EB1 424 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 HSPBAP1Q96EW2 488 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 GIMAP5Q96F15 307 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 SLC35A4Q96G79 324 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 MAELQ96JY0 434 aaKnown RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 GPR137Q96N19 417 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 AMDHD1Q96NU7 426 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 NPAS1Q99742 590 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 RSPO3Q9BXY4 272 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 IQCGQ9H095 443 aaKnown RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.25□□□□□ -1.57
CUX1-208ENST00000485792 STMN4Q9H169 189 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 NXF5Q9H1B4 397 aaKnown RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 GLIPR2Q9H4G4 154 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 SERHL2Q9H4I8 314 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 HEATR1Q9H583 2144 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms