RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 FRRS1Q6ZNA5 592 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 MOB2Q70IA6 237 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 Q7L0L9 218 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 EFL1Q7Z2Z2 1120 aaKnown RBP3.81□□□□□ -1.8
VPS13A-211ENST00000484581 ANKRD37Q7Z713 158 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 NR4A3Q92570 626 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 LHX4Q969G2 390 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 NT5C3BQ969T7 300 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 C11orf52Q96A22 123 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 TPD52L3Q96J77 140 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 SLC30A2Q9BRI3 323 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 GPR174Q9BXC1 333 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 MED20Q9H944 212 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 GPN2Q9H9Y4 310 aaPredicted RBP3.81□□□□□ -1.8
VPS13A-211ENST00000484581 FN3KRPQ9HA64 309 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 DCAF13Q9NV06 445 aaKnown RBP3.81□□□□□ -1.8
VPS13A-211ENST00000484581 RBM28Q9NW13 759 aaKnown RBP3.81□□□□□ -1.8
VPS13A-211ENST00000484581 DUS2Q9NX74 493 aaKnown RBP3.81□□□□□ -1.8
VPS13A-211ENST00000484581 EIF3KQ9UBQ5 218 aaKnown RBP3.81□□□□□ -1.8
VPS13A-211ENST00000484581 CIDEBQ9UHD4 219 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 EIF3LQ9Y262 564 aaKnown RBP3.81□□□□□ -1.8
VPS13A-211ENST00000484581 DHRS7Q9Y394 339 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 A0A0J9YVX5 310 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 ESYT2A0FGR8 921 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 CTAGE15A4D2H0 777 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 G3V2L1 256 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 FAM72CH0Y354 149 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 PDLIM1O00151 329 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 ZNF208O43345 1280 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 DUX1O43812 170 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 IGSF6O95976 241 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 OAS1P00973 400 aaKnown RBP3.8□□□□□ -1.8
VPS13A-211ENST00000484581 TOP1P11387 765 aaKnown RBP3.8□□□□□ -1.8
VPS13A-211ENST00000484581 ANXA3P12429 323 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 FOSL2P15408 326 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 GNB3P16520 340 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 SELEP16581 610 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 MMP12P39900 470 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 RAG2P55895 527 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 IDI1Q13907 227 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 KIAA0141Q14154 515 aaPredicted RBP3.8□□□□□ -1.8
VPS13A-211ENST00000484581 FASTKQ14296 549 aaKnown RBP3.8□□□□□ -1.8
VPS13A-211ENST00000484581 EMC2Q15006 297 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 ECSCRQ19T08 205 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 HLA-BQ31612 363 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 CFAP221Q4G0U5 840 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 STPG1Q5TH74 334 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 FAM72AQ5TYM5 149 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 GFI1BQ5VTD9 330 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 WDR25Q64LD2 544 aaPredicted RBP3.8□□□□□ -1.8
VPS13A-211ENST00000484581 TPGS2Q68CL5 300 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 TMEM225Q6GV28 225 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 FAM72DQ6L9T8 149 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 Q6ZPB1 254 aaPredicted RBP3.8□□□□□ -1.8
VPS13A-211ENST00000484581 CTAGE6Q86UF2 777 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 PARGQ86W56 976 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 FAM72BQ86X60 149 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 LRRC75A-AS1Q8N1F1 130 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 OR4F17Q8NGA8 305 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 OR8J1Q8NGP2 316 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 SPPL2AQ8TCT8 520 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 MRGPRDQ8TDS7 321 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 TMEM190Q8WZ59 177 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 COQ2Q96H96 371 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 ELMO2Q96JJ3 720 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 CNOT6LQ96LI5 555 aaKnown RBP3.8□□□□□ -1.8
VPS13A-211ENST00000484581 OR4F4Q96R69 305 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 FEM1AQ9BSK4 669 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 CLEC7AQ9BXN2 247 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 PIPOXQ9P0Z9 390 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 CRLS1Q9UJA2 301 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 ICAM5Q9UMF0 924 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 NIP7Q9Y221 180 aaKnown RBP eCLIP3.8□□□□□ -1.8
VPS13A-211ENST00000484581 GSTK1Q9Y2Q3 226 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 EXOSC1Q9Y3B2 195 aaKnown RBP3.8□□□□□ -1.8
VPS13A-211ENST00000484581 WDR45Q9Y484 360 aa3.8□□□□□ -1.8
VPS13A-211ENST00000484581 NSD2O96028 1365 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 BTN3A3O00478 584 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 TRAFD1O14545 582 aaPredicted RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 ARPC3O15145 178 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 RANBP6O60518 1105 aaKnown RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 LMX1BO60663 402 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 DBTP11182 482 aaKnown RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 H2AFXP16104 143 aaPredicted RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 TBXA2RP21731 343 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 UCP1P25874 307 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 CHRNB4P30926 498 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 ACTR3P61158 418 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 SNRPD1P62314 119 aaKnown RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 RPL23AP62750 156 aaKnown RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 RPS27AP62979 156 aaKnown RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 RPL36AP83881 106 aaKnown RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 CSTF1Q05048 431 aaKnown RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 MRPL28Q13084 256 aaKnown RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 ZNF177Q13360 481 aaPredicted RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 MESDQ14696 234 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 FAM189A2Q15884 450 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 MAPK6Q16659 721 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 KNOP1Q1ED39 458 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms