RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 PPP1R36Q96LQ0 422 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 GNRHR2Q96P88 292 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 BTBD9Q96Q07 612 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 ADOQ96SZ5 270 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 OSBPL11Q9BXB4 747 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 REEP4Q9H6H4 257 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 DDX18Q9NVP1 670 aaKnown RBP11.24□□□□□ -0.61
MSH5-216ENST00000484309 ALKBH4Q9NXW9 302 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 TAS2R7Q9NYW3 318 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 SH3BP4Q9P0V3 963 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 ACAD8Q9UKU7 415 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 MAPRE3Q9UPY8 281 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 ITPR2Q14571 2701 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 DOCK7Q96N67 2140 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 C15orf38-AP3S2A0A0A6YYH1 394 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 A0A1B0GVC2 190 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 ANKRD33BA6NCL7 494 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 PRAMEF25A6NGN4 478 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 C19orf84I3L1E1 186 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 UPK1AO00322 258 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 TO15178 435 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 COQ9O75208 318 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 CLDN14O95500 239 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 BCKDHAP12694 445 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 NAGAP17050 411 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 BGNP21810 368 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 IL12BP29460 328 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 GPC1P35052 558 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 KRT20P35900 424 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 SERPINB5P36952 375 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 CDK9P50750 372 aaKnown RBP11.23□□□□□ -0.61
MSH5-216ENST00000484309 NUP107P57740 925 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 ART3Q13508 389 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 PTGR1Q14914 329 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 PDCD2Q16342 344 aaPredicted RBP11.23□□□□□ -0.61
MSH5-216ENST00000484309 XKRXQ6PP77 449 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 LARP4Q71RC2 724 aaKnown RBP eCLIP11.23□□□□□ -0.61
MSH5-216ENST00000484309 SZRD1Q7Z422 152 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 EID3Q8N140 333 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 ZNF781Q8N8C0 355 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 ANKRD42Q8N9B4 389 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 SARAFQ96BY9 339 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 ERP27Q96DN0 273 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 ELP4Q96EB1 424 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 PPP3R2Q96LZ3 170 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 COL21A1Q96P44 957 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 SECISBP2Q96T21 854 aaKnown RBP11.23□□□□□ -0.61
MSH5-216ENST00000484309 PAIP2Q9BPZ3 127 aaKnown RBP11.23□□□□□ -0.61
MSH5-216ENST00000484309 STMN4Q9H169 189 aaPredicted RBP11.23□□□□□ -0.61
MSH5-216ENST00000484309 EQTNQ9NQ60 294 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 TAS2R9Q9NYW1 312 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 C19orf53Q9UNZ5 99 aaPredicted RBP11.23□□□□□ -0.61
MSH5-216ENST00000484309 C15orf41Q9Y2V0 281 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 WBP11Q9Y2W2 641 aaKnown RBP11.23□□□□□ -0.61
MSH5-216ENST00000484309 SLC6A5Q9Y345 797 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 TMED5Q9Y3A6 229 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 OR10H1Q9Y4A9 318 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 NOTCH2Q04721 2471 aa11.23□□□□□ -0.61
MSH5-216ENST00000484309 A0A087WV62 115 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 OR14I1A6ND48 311 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 C17orf51A8MQB3 221 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 BCKDKO14874 412 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 TM9SF1O15321 606 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 SUSD5O60279 629 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 TSPAN2O60636 221 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 HCN1O60741 890 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 ICOSLGO75144 302 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 SNX4O95219 450 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 SERPINE1P05121 402 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 TUBBP07437 444 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 MYZAPP0CAP1 466 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 ACVR2AP27037 513 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 PTPN6P29350 595 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 RFX3P48380 749 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 ABCE1P61221 599 aaKnown RBP11.22□□□□□ -0.61
MSH5-216ENST00000484309 PSG6Q00889 435 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 PMPCAQ10713 525 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 PDE7AQ13946 482 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 ATP6AP1LQ52LC2 224 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 EIPR1Q53HC9 387 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 TNFAIP8L3Q5GJ75 292 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 WIPI1Q5MNZ9 446 aaPredicted RBP11.22□□□□□ -0.61
MSH5-216ENST00000484309 C6orf136Q5SQH8 315 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 WLSQ5T9L3 541 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 YRDCQ86U90 279 aaKnown RBP11.22□□□□□ -0.61
MSH5-216ENST00000484309 CCDC71Q8IV32 467 aaPredicted RBP11.22□□□□□ -0.61
MSH5-216ENST00000484309 OR2L13Q8N349 312 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 FNDC5Q8NAU1 212 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 OR7A2PQ8NGA2 310 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 OR1J4Q8NGS1 313 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 NEIL3Q8TAT5 605 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 FBXO30Q8TB52 745 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 MGARPQ8TDB4 240 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 TUBGCP3Q96CW5 907 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 SLC35A4Q96G79 324 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 TMEM41AQ96HV5 264 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 C20orf27Q9GZN8 174 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 UBQLN3Q9H347 655 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 CELSR2Q9HCU4 2923 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 SSU72Q9NP77 194 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms