RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 MICAQ29983 383 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 TYW3Q6IPR3 259 aaKnown RBP13.09□□□□□ -0.31
CLK3-204ENST00000483723 DBX2Q6ZNG2 339 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 LACC1Q8IV20 430 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 METTL27Q8N6F8 245 aaPredicted RBP13.09□□□□□ -0.31
CLK3-204ENST00000483723 C7orf57Q8NEG2 295 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 RIT1Q92963 219 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 MUS81Q96NY9 551 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 ARHGDIGQ99819 225 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 NDC1Q9BTX1 674 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 YTHDF1Q9BYJ9 559 aaKnown RBP13.09□□□□□ -0.31
CLK3-204ENST00000483723 ZNF350Q9GZX5 532 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 NECTIN3Q9NQS3 549 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 NINQ8N4C6 2090 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 NUP210LQ5VU65 1888 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 IGHV5-10-1A0A0J9YXX1 117 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 LOC100130705A0A1B0GUX0 176 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 ARRDC5A6NEK1 342 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
CLK3-204ENST00000483723 SMNDC1O75940 238 aaKnown RBP eCLIP13.08□□□□□ -0.326e-7■■□□□ 13.7
CLK3-204ENST00000483723 ZNF883P0CG24 379 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 ANXA8P13928 327 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 FUT4P22083 530 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 ALAS2P22557 587 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 PIGAP37287 484 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 DUSP3P51452 185 aaPredicted RBP13.08□□□□□ -0.32
CLK3-204ENST00000483723 CDH12P55289 794 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 ACY1Q03154 408 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 IL18R1Q13478 541 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 EXOC3L2Q2M3D2 409 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 PRAMEF17Q5VTA0 474 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 MLIPQ5VWP3 458 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 RBM45Q8IUH3 476 aaKnown RBP13.08□□□□□ -0.32
CLK3-204ENST00000483723 ZNF555Q8NEP9 628 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 OR52R1Q8NGF1 315 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.08□□□□□ -0.32
CLK3-204ENST00000483723 DGAT2Q96PD7 388 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 FUZQ9BT04 418 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 GRIP2Q9C0E4 1043 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 ZNF304Q9HCX3 659 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 DHCR7Q9UBM7 475 aaKnown RBP13.08□□□□□ -0.32
CLK3-204ENST00000483723 GMEB2Q9UKD1 530 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 A4GNTQ9UNA3 340 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 SLC9A8Q9Y2E8 581 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 IFT52Q9Y366 437 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 ORC6Q9Y5N6 252 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 MAU2Q9Y6X3 613 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 IGKV3D-11A0A0A0MRZ8 115 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 DPPA5A6NC42 116 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 CDC123O75794 336 aaPredicted RBP13.08□□□□□ -0.32
CLK3-204ENST00000483723 GADD45GO95257 159 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 RPS4Y1P22090 263 aaKnown RBP13.08□□□□□ -0.32
CLK3-204ENST00000483723 POLR2IP36954 125 aaKnown RBP13.08□□□□□ -0.32
CLK3-204ENST00000483723 RPS6KA3P51812 740 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 APOFQ13790 326 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 ZNF311Q5JNZ3 666 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 COLEC12Q5KU26 742 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 QSOX2Q6ZRP7 698 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 OR10G2Q8NGC3 310 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 OR52P1PQ8NH57 321 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 IFI44Q8TCB0 444 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 PHF10Q8WUB8 498 aaKnown RBP13.08□□□□□ -0.32
CLK3-204ENST00000483723 QRSL1Q9H0R6 528 aaKnown RBP13.08□□□□□ -0.32
CLK3-204ENST00000483723 NMNAT1Q9HAN9 279 aaPredicted RBP13.08□□□□□ -0.32
CLK3-204ENST00000483723 FANCEQ9HB96 536 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 POLE3Q9NRF9 147 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 MYRFQ9Y2G1 1151 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 WDR45Q9Y484 360 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 PCDHGA5Q9Y5G8 931 aa13.08□□□□□ -0.32
CLK3-204ENST00000483723 A0A1B0GX78 115 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 OR2W5A6NFC9 320 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 NTN3O00634 580 aaPredicted RBP13.07□□□□□ -0.32
CLK3-204ENST00000483723 PCDH17O14917 1159 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 UGT2B11O75310 529 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 STX11O75558 287 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 THBS1P07996 1170 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 CDH2P19022 906 aaPredicted RBP13.07□□□□□ -0.32
CLK3-204ENST00000483723 MAOAP21397 527 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 SMIM11AP58511 58 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 PSG6Q00889 435 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 KCTD21Q4G0X4 260 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 DCST2Q5T1A1 773 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 ZNF770Q6IQ21 691 aaPredicted RBP13.07□□□□□ -0.32
CLK3-204ENST00000483723 RHBDD2Q6NTF9 364 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 THAP5Q7Z6K1 395 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 VRK2Q86Y07 508 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 OFCC1Q8IZS5 231 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 SLC5A8Q8N695 610 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 ATG16L2Q8NAA4 619 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 OR6T1Q8NGN1 323 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 OR52J3Q8NH60 311 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 FBLIM1Q8WUP2 373 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 CNDP2Q96KP4 475 aaKnown RBP13.07□□□□□ -0.32
CLK3-204ENST00000483723 VSTM2LQ96N03 204 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 ALPK1Q96QP1 1244 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 FEVQ99581 238 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 TRIM45Q9H8W5 580 aaPredicted RBP13.07□□□□□ -0.32
CLK3-204ENST00000483723 FOLH1BQ9HBA9 442 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 SIDT1Q9NXL6 827 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms