RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 C1orf112Q9NSG2 853 aa9.8□□□□□ -0.84
PRPF4B-206ENST00000481109 DCAF13Q9NV06 445 aaKnown RBP9.8□□□□□ -0.84
PRPF4B-206ENST00000481109 RNF19AQ9NV58 838 aa9.8□□□□□ -0.84
PRPF4B-206ENST00000481109 ZSCAN32Q9NX65 697 aa9.8□□□□□ -0.84
PRPF4B-206ENST00000481109 TAS2R10Q9NYW0 307 aa9.8□□□□□ -0.84
PRPF4B-206ENST00000481109 PIPOXQ9P0Z9 390 aa9.8□□□□□ -0.84
PRPF4B-206ENST00000481109 IKZF3Q9UKT9 509 aa9.8□□□□□ -0.84
PRPF4B-206ENST00000481109 SLC35A3Q9Y2D2 325 aa9.8□□□□□ -0.84
PRPF4B-206ENST00000481109 FIS1Q9Y3D6 152 aa9.8□□□□□ -0.84
PRPF4B-206ENST00000481109 KIAA1551Q9HCM1 1747 aa9.8□□□□□ -0.84
PRPF4B-206ENST00000481109 TBC1D3KA0A087X1G2 549 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 TBC1D3FA6NER0 549 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 SLC28A2O43868 658 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 ABLIM3O94929 683 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 RPP14O95059 124 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 HIST1H2ABP04908 130 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 SLC35E2BP0CK96 405 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 THEGLP0DJG4 465 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 PIPP12273 146 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 CPN1P15169 458 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 CD200P41217 278 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 ZFP36L2P47974 494 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 RSU1Q15404 277 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 FAM83EQ2M2I3 478 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 ETFRF1Q6IPR1 90 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 NPNTQ6UXI9 565 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 QSOX2Q6ZRP7 698 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 RNF165Q6ZSG1 346 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 HIST3H2AQ7L7L0 130 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 SPATA19Q7Z5L4 167 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 ZNF605Q86T29 641 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 PPP1R3BQ86XI6 285 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 HS6ST3Q8IZP7 471 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 OR5M1Q8NGP8 315 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 MRGPRDQ8TDS7 321 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 ACOT12Q8WYK0 555 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 HIST1H2ACQ93077 130 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 RELTQ969Z4 430 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 ADAT1Q9BUB4 502 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 TMEM106CQ9BVX2 250 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 DERL2Q9GZP9 239 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 SARS2Q9NP81 518 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 TNFRSF12AQ9NP84 129 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 NT5MQ9NPB1 228 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 TMEM138Q9NPI0 162 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 PDLIM7Q9NR12 457 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 CFAP97Q9P2B7 532 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 GDF2Q9UK05 429 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 LSM2Q9Y333 95 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 STARD10Q9Y365 291 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 COL14A1Q05707 1796 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 CCDC187A0A096LP49 1063 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 LOC285095A0A1B0GVY8 99 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 OR2M5A3KFT3 312 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 FAM221AA4D161 298 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 SPDYE2BA6NHP3 402 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 SCN2BO60939 215 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 CALCAP01258 141 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 GKN3PP0CG01 181 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 SPDYE6P0CI01 402 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 TM4SF1P30408 202 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 MNDAP41218 407 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 PPM1FP49593 454 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 STK19P49842 368 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 TAP2Q03519 686 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 CAMK2GQ13555 558 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 SPDYE2Q495Y8 402 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 C14orf28Q4W4Y0 310 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 FAM182BQ5T319 152 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 FBXW9Q5XUX1 488 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 CDPF1Q6NVV7 123 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 UBA3Q8TBC4 463 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 FAM120BQ96EK7 910 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 PHYHIPLQ96FC7 376 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 TCTN2Q96GX1 697 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 CDKN2AIPNLQ96HQ2 116 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 FAM210BQ96KR6 192 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 ZNF583Q96ND8 569 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 GINS4Q9BRT9 223 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 ARL6Q9H0F7 186 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 SLC26A1Q9H2B4 701 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 OR52A5Q9H2C5 316 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 SLC25A19Q9HC21 320 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 TREM1Q9NP99 234 aa9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 PRMT7Q9NVM4 692 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-206ENST00000481109 DUXAA6NLW8 204 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 TRDCB7Z8K6 153 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 AGRPO00253 132 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 TPST2O60704 377 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 ITGA10O75578 1167 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 AP2A2O94973 939 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 INHAP05111 366 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 AHCYP23526 432 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 EPHA2P29317 976 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 MPGP29372 298 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 GNA15P30679 374 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 CCR4P51679 360 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 LSM11P83369 360 aaKnown RBP eCLIP9.78□□□□□ -0.841e-7■□□□□ 8.1
PRPF4B-206ENST00000481109 SORDQ00796 357 aa9.78□□□□□ -0.84
PRPF4B-206ENST00000481109 EGR3Q06889 387 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms