RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 TMED5Q9Y3A6 229 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 FIS1Q9Y3D6 152 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 PTGDR2Q9Y5Y4 395 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 AHRRA9YTQ3 701 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 GNB5O14775 395 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 SNPHO15079 494 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 TSPAN2O60636 221 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 LINC00032P0C843 101 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 PTPN6P29350 595 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 IL12BP29460 328 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 PTGDSP41222 190 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 PNLIPRP2P54317 469 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 CORO7P57737 925 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 MRPS22P82650 360 aaKnown RBP13.72□□□□□ -0.21
TDP2-205ENST00000480495 CRYZQ08257 329 aaKnown RBP13.72□□□□□ -0.21
TDP2-205ENST00000480495 ZNF155Q12901 538 aaPredicted RBP13.72□□□□□ -0.21
TDP2-205ENST00000480495 SF3B4Q15427 424 aaKnown RBP eCLIP13.72□□□□□ -0.212e-9■■■■□ 26.5
TDP2-205ENST00000480495 PRSS53Q2L4Q9 553 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 ARL13AQ5H913 290 aaPredicted RBP13.72□□□□□ -0.21
TDP2-205ENST00000480495 NHSL2Q5HYW2 709 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 DESI1Q6ICB0 168 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 NPSR1Q6W5P4 371 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 CCDC71Q8IV32 467 aaPredicted RBP13.72□□□□□ -0.21
TDP2-205ENST00000480495 SLC44A2Q8IWA5 706 aaPredicted RBP13.72□□□□□ -0.21
TDP2-205ENST00000480495 ULK2Q8IYT8 1036 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 EGLN2Q96KS0 407 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 ADOQ96SZ5 270 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 MECRQ9BV79 373 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 TRIM8Q9BZR9 551 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 TUBB1Q9H4B7 451 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 GLIPR2Q9H4G4 154 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.72□□□□□ -0.21
TDP2-205ENST00000480495 OR10H1Q9Y4A9 318 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 TRAF6Q9Y4K3 522 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 DNAJC15Q9Y5T4 150 aa13.72□□□□□ -0.21
TDP2-205ENST00000480495 V9GYY5 206 aaPredicted RBP13.72□□□□□ -0.21
TDP2-205ENST00000480495 LSM1O15116 133 aaKnown RBP13.71□□□□□ -0.21
TDP2-205ENST00000480495 TBX19O60806 448 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 CBR3O75828 277 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 TOXO94900 526 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 CHRNGP07510 517 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 TACR1P25103 407 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 GCKP35557 465 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 MC3RP41968 323 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 ZFP36L2P47974 494 aaKnown RBP13.71□□□□□ -0.21
TDP2-205ENST00000480495 TOMM20Q15388 145 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 UGT3A2Q3SY77 523 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 RIPPLY2Q5TAB7 128 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 VASNQ6EMK4 673 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 TMEM107Q6UX40 140 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 LARP4Q71RC2 724 aaKnown RBP eCLIP13.71□□□□□ -0.21
TDP2-205ENST00000480495 DDIASQ8IXT1 998 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 OR2L13Q8N349 312 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 OR2T11Q8NH01 316 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 TWIST2Q8WVJ9 160 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 ELP4Q96EB1 424 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 TIMP4Q99727 224 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 TREX2Q9BQ50 279 aaPredicted RBP13.71□□□□□ -0.21
TDP2-205ENST00000480495 PARD6BQ9BYG5 372 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 REEP4Q9H6H4 257 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 GALNT9Q9HCQ5 603 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 DDX18Q9NVP1 670 aaKnown RBP13.71□□□□□ -0.21
TDP2-205ENST00000480495 NINQ8N4C6 2090 aa13.71□□□□□ -0.21
TDP2-205ENST00000480495 A0A0G2JNJ9 132 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 TTC36A6NLP5 189 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 FAM90A27PA6NNH2 459 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 UPK1AO00322 258 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 PDPK1O15530 556 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 PSMG1O95456 288 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 DDX5P17844 614 aaKnown RBP13.7□□□□□ -0.22
TDP2-205ENST00000480495 SDC1P18827 310 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 SSTR2P30874 369 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 ASMTP46597 345 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 RPL38P63173 70 aaKnown RBP13.7□□□□□ -0.22
TDP2-205ENST00000480495 PSG6Q00889 435 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 TFF3Q07654 80 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 ZNHIT3Q15649 155 aaPredicted RBP13.7□□□□□ -0.22
TDP2-205ENST00000480495 CYP27C1Q4G0S4 372 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 RFTN2Q52LD8 501 aaPredicted RBP13.7□□□□□ -0.22
TDP2-205ENST00000480495 EIPR1Q53HC9 387 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 SH2D4BQ5SQS7 431 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 MEX3BQ6ZN04 569 aaKnown RBP13.7□□□□□ -0.22
TDP2-205ENST00000480495 PLCZ1Q86YW0 608 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 FAM83FQ8NEG4 500 aaPredicted RBP13.7□□□□□ -0.22
TDP2-205ENST00000480495 ZFP28Q8NHY6 868 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 RNF138Q8WVD3 245 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 UCK2Q9BZX2 261 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 PRDM14Q9GZV8 571 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 Q9UFV3 132 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 MAPRE3Q9UPY8 281 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 SLC6A5Q9Y345 797 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 WIF1Q9Y5W5 379 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 CACNA1CQ13936 2221 aa13.7□□□□□ -0.22
TDP2-205ENST00000480495 PHF3Q92576 2039 aaKnown RBP13.69□□□□□ -0.22
TDP2-205ENST00000480495 EXPH5Q8NEV8 1989 aa13.69□□□□□ -0.22
TDP2-205ENST00000480495 NKX2-6A6NCS4 301 aa13.69□□□□□ -0.22
TDP2-205ENST00000480495 C2orf72A6NCS6 295 aa13.69□□□□□ -0.22
TDP2-205ENST00000480495 HSPB2A8KAH6 182 aa13.69□□□□□ -0.22
TDP2-205ENST00000480495 TMEM233B4DJY2 109 aa13.69□□□□□ -0.22
TDP2-205ENST00000480495 PIP5K1BO14986 540 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms