RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 SEMA7AO75326 666 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 BCAS2O75934 225 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 KRT34O76011 436 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 HMGN2P05204 90 aaKnown RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 SNRPB2P08579 225 aaKnown RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 ACP2P11117 423 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 DDX5P17844 614 aaKnown RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 TRHRP34981 398 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 SOX3P41225 446 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 MVDP53602 400 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 RPS26P62854 115 aaKnown RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 AP2B1P63010 937 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 MAPKAPK3Q16644 382 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 ZNF791Q3KP31 576 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 ABHD17BQ5VST6 288 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 SPINK14Q6IE38 97 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 MFSD12Q6NUT3 480 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 ZNF621Q6ZSS3 439 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 ASB18Q6ZVZ8 466 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 SLC29A4Q7RTT9 530 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 PRR22Q8IZ63 422 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 LGI4Q8N135 537 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 VPS37AQ8NEZ2 397 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 AURKBQ96GD4 344 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 BTBD9Q96Q07 612 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 PHF12Q96QT6 1004 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 PANX1Q96RD7 426 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 LMF2Q9BU23 707 aaKnown RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 NSRP1Q9H0G5 558 aaKnown RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 TRIM45Q9H8W5 580 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 C3orf14Q9HBI5 128 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 EQTNQ9NQ60 294 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 ZCCHC3Q9NUD5 404 aaKnown RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 FBXO34Q9NWN3 711 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 VPS4AQ9UN37 437 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 ARL2BPQ9Y2Y0 163 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 PCDHB14Q9Y5E9 798 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 C2CD3Q4AC94 2353 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 TNRC6AQ8NDV7 1962 aaKnown RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 TRBV5-3A0A0A0MS03 114 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 RFXANKO14593 260 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 TO15178 435 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 ERN1O75460 977 aaKnown RBP11.27□□□□□ -0.61
TRA2B-212ENST00000480461 NEURL1O76050 574 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 IGKV1D-16P01601 117 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 ZCCHC18P0CG32 403 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 POU3F2P20265 443 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-212ENST00000480461 UQCRC2P22695 453 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 GABRA3P34903 492 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 TRPC1P48995 793 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 RIPPLY3P57055 190 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 KCNK10P57789 538 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 DUSP5Q16690 384 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 PLEKHN1Q494U1 663 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-212ENST00000480461 NADK2Q4G0N4 442 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 COX20Q5RI15 118 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 C6orf163Q5TEZ5 329 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 IRAK1BP1Q5VVH5 260 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 SAXO2Q658L1 398 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 IL20RBQ6UXL0 311 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 MSANTD1Q6ZTZ1 278 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 MDGA2Q7Z553 956 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 SLC44A2Q8IWA5 706 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-212ENST00000480461 C10orf111Q8N326 155 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 POU5F2Q8N7G0 328 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 ANKS4BQ8N8V4 417 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 TEX19Q8NA77 164 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 GALNT11Q8NCW6 608 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 C17orf47Q8NEP4 570 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 FBXO30Q8TB52 745 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 SFXN5Q8TD22 340 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 TSPEARQ8WU66 669 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 PIK3R3Q92569 461 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 ITCHQ96J02 903 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 LCORQ96JN0 433 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-212ENST00000480461 MFRPQ9BY79 579 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 HES7Q9BYE0 225 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 PRODH2Q9UF12 536 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 PCDHGB4Q9UN71 923 aa11.27□□□□□ -0.61
TRA2B-212ENST00000480461 OTOGQ6ZRI0 2925 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 RP1L1Q8IWN7 2480 aaPredicted RBP11.26□□□□□ -0.61
TRA2B-212ENST00000480461 A0A096LPI6 279 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 RNF103-CHMP3A0A140T963 221 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 PRAMEF27A3QJZ7 478 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 FRG2CA6NGY1 282 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 CCDC22O60826 627 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 COQ9O75208 318 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 NKX2-2O95096 273 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 UNC5CO95185 931 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 FBXO45P0C2W1 286 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 COL8A1P27658 744 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 ABCD3P28288 659 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 ADSLP30566 484 aaPredicted RBP11.26□□□□□ -0.61
TRA2B-212ENST00000480461 DCTP40126 519 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 TNFSF10P50591 281 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 HLCSP50747 726 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 SSR4P51571 173 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 TP53BP2Q13625 1128 aa11.26□□□□□ -0.61
TRA2B-212ENST00000480461 LASP1Q14847 261 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms