RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 MICAQ29983 383 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 EIPR1Q53HC9 387 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 ZNF311Q5JNZ3 666 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 SNAP47Q5SQN1 464 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 DCST2Q5T1A1 773 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 TYW3Q6IPR3 259 aaKnown RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 RHBDD2Q6NTF9 364 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 TCTN3Q6NUS6 607 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 ZNF574Q6ZN55 896 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 FRRS1Q6ZNA5 592 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 DBX2Q6ZNG2 339 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 TTLL10Q6ZVT0 673 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 PEX5LQ8IYB4 626 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 C8orf59Q8N0T1 100 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 ZNF619Q8N2I2 560 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 COX18Q8N8Q8 333 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 ATG16L2Q8NAA4 619 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 SETD9Q8NE22 299 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 TOR1AIP2Q8NFQ8 470 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 OR10G2Q8NGC3 310 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 OR52R1Q8NGF1 315 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 OR52P1PQ8NH57 321 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 IFI44Q8TCB0 444 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 PHF10Q8WUB8 498 aaKnown RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 SLC9A6Q92581 669 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 CDS1Q92903 461 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 RMND5BQ96G75 393 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 PRRC1Q96M27 445 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 GABARAPL3Q9BY60 117 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 MRPS26Q9BYN8 205 aaKnown RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 ANKRD19PQ9H560 264 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 MKKSQ9NPJ1 570 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 KRT84Q9NSB2 600 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 TUBA8Q9NY65 449 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 PRODH2Q9UF12 536 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 SLC13A4Q9UKG4 626 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 POFUT2Q9Y2G5 429 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 HCN4Q9Y3Q4 1203 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 TESMINQ9Y4I5 508 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 TMEM184BQ9Y519 407 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 NUP210LQ5VU65 1888 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 IGKV3D-11A0A0A0MRZ8 115 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 IGHV5-10-1A0A0J9YXX1 117 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 LOC100130705A0A1B0GUX0 176 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 A0A1W2PRQ8 180 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 AGAP5A6NIR3 686 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 A8MU76 341 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 TGFBR3LH3BV60 316 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 FAAHO00519 579 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 DYRK3O43781 588 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 KIAA0513O60268 411 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 SMNDC1O75940 238 aaKnown RBP eCLIP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 CCNB2O95067 398 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 DBIP07108 87 aaKnown RBP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 H1F0P07305 194 aaKnown RBP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 GP1BAP07359 652 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 CYC1P08574 325 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 SMIM18P0DKX4 95 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 IFNA8P32881 189 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 TRHRP34981 398 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 RORAP35398 523 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 PDX1P52945 283 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 CDH12P55289 794 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 DAB2P98082 770 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 ZNF155Q12901 538 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 PPP1R8Q12972 351 aaKnown RBP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 TOP3AQ13472 1001 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 APOFQ13790 326 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 DGCR6Q14129 220 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 EXOC3L2Q2M3D2 409 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 ZIK1Q3SY52 487 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 LIN52Q52LA3 116 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 MLIPQ5VWP3 458 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 TTC33Q6PID6 262 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 THAP5Q7Z6K1 395 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 PARP8Q8N3A8 854 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 FBLIM1Q8WUP2 373 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 SLC35B4Q969S0 331 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 FBXL20Q96IG2 436 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 VSTM2LQ96N03 204 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 PITX2Q99697 317 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 BARD1Q99728 777 aaKnown RBP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 RSPO3Q9BXY4 272 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 RBCK1Q9BYM8 510 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 GRIP2Q9C0E4 1043 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 TGIF2Q9GZN2 237 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 ARMC7Q9H6L4 198 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 ANKRA2Q9H9E1 313 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 ZNF556Q9HAH1 456 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 FOLH1BQ9HBA9 442 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 NECTIN3Q9NQS3 549 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 FSCN3Q9NQT6 498 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 SIDT1Q9NXL6 827 aaKnown RBP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 TMCC3Q9ULS5 477 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 CFL2Q9Y281 166 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 PCDHGA8Q9Y5G5 932 aa10.26□□□□□ -0.77
VTI1A-204ENST00000480057 HEMK1Q9Y5R4 338 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-204ENST00000480057 IGLV3-12A0A075B6K2 115 aa10.25□□□□□ -0.77
VTI1A-204ENST00000480057 TRIM64CA6NLI5 447 aa10.25□□□□□ -0.77
VTI1A-204ENST00000480057 PATE3B3GLJ2 98 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms