RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 C9orf50Q5SZB4 431 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 NKAIN4Q8IVV8 208 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 SFTPA2Q8IWL1 248 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 ZFPM2Q8WW38 1151 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 OR7D2Q96RA2 312 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 DCLRE1CQ96SD1 692 aaKnown RBP10.15□□□□□ -0.79
VPS52-217ENST00000478934 TAS2R7Q9NYW3 318 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 TBC1D29Q9UFV1 150 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 CES1P1Q9UKY3 287 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 TBC1D3DA0A087WVF3 549 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TBC1D3IA0A087WXS9 549 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TBC1D3EA0A087X179 549 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TBC1D3KA0A087X1G2 549 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TBC1D3FA6NER0 549 aaPredicted RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 TBC1D3LB9A6J9 549 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 C5orf67F2Z3F1 127 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 PRICKLE3O43900 615 aaPredicted RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 PIP5K1CO60331 668 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 NCR1O76036 304 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 SLITRK5O94991 958 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 SLC2A10O95528 541 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 THY1P04216 161 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 ASGR2P07307 311 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TBC1D3HP0C7X1 549 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 FUT1P19526 365 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 PPP2R1BP30154 601 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 GDI1P31150 447 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 SDC2P34741 201 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 HSD17B2P37059 387 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 DEFA1P59665 94 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 DEFA3P59666 94 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 RPS25P62851 125 aaKnown RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 RACK1P63244 317 aaKnown RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 ALDH6A1Q02252 535 aaKnown RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 TIMM50Q3ZCQ8 353 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 ZNF311Q5JNZ3 666 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 ARMC4Q5T2S8 1044 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TBC1D3GQ6DHY5 549 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TBC1D3CQ6IPX1 549 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 FAM111BQ6SJ93 734 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TMPRSS11AQ6ZMR5 421 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 LHFPL3Q86UP9 236 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 KRT73Q86Y46 540 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TBC1D3Q8IZP1 549 aaPredicted RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 FRMD1Q8N878 549 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 SLC16A11Q8NCK7 471 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 NLGN4YQ8NFZ3 816 aaPredicted RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 ZCCHC10Q8TBK6 192 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 ZNF486Q96H40 463 aaPredicted RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 SLC17A9Q9BYT1 436 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 SAP130Q9H0E3 1048 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 SLC38A1Q9H2H9 487 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 PHPT1Q9NRX4 125 aaPredicted RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 NDOR1Q9UHB4 597 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 ZNF232Q9UNY5 417 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 RPL36Q9Y3U8 105 aaKnown RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 ZNF860A6NHJ4 632 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 MSL3P1P0C860 447 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 PIPP12273 146 aaPredicted RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 DRD2P14416 443 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 GPR4P46093 362 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 KHKP50053 298 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 PDX1P52945 283 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 GAS1P54826 345 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TAS2R41P59536 307 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 RHAGQ02094 409 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 NCF4Q15080 339 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 FAM214AQ32MH5 1076 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TMEM201Q5SNT2 666 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 ATAD3CQ5T2N8 411 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 CCNJQ5T5M9 372 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 MRM1Q6IN84 353 aaKnown RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 SLC30A6Q6NXT4 461 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 FAM131AQ6UXB0 335 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 DTX3Q8N9I9 347 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 NUP43Q8NFH3 380 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 OR2L8Q8NGY9 312 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 HERVK_113Q902F9 699 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 FGF11Q92914 225 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 OTULINQ96BN8 352 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 C1GALT1C1Q96EU7 318 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 MYADMQ96S97 322 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 NELL2Q99435 816 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 CTRCQ99895 268 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TTYH2Q9BSA4 534 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 MND1Q9BWT6 205 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 PRRG3Q9BZD7 231 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 NT5DC2Q9H857 520 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 TXNL4BQ9NX01 149 aaKnown RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 KLHL3Q9UH77 587 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 DPP7Q9UHL4 492 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 ENOPH1Q9UHY7 261 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 STUB1Q9UNE7 303 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 WBP11Q9Y2W2 641 aaKnown RBP10.14□□□□□ -0.79
VPS52-217ENST00000478934 A3GALT2U3KPV4 340 aa10.14□□□□□ -0.79
VPS52-217ENST00000478934 A0A1W2PQL4 384 aaPredicted RBP10.13□□□□□ -0.79
VPS52-217ENST00000478934 SLC35F4A4IF30 521 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 DVL2O14641 736 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 PROM1O43490 865 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 HYAL3O43820 417 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms