RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ABCB1P08183 1280 aaPredicted RBP24.66■■□□□ 1.54
CCM2-211ENST00000478582 NCF2P19878 526 aaPredicted RBP24.66■■□□□ 1.54
CCM2-211ENST00000478582 LSP1P33241 339 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 PRKAG1P54619 331 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 ESPL1Q14674 2120 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 ZNHIT3Q15649 155 aaPredicted RBP24.66■■□□□ 1.54
CCM2-211ENST00000478582 NNATQ16517 81 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 MAPKAPK3Q16644 382 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 MFSD12Q6NUT3 480 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 ANKRD46Q86W74 232 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 FUNDC1Q8IVP5 155 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 SLC34A3Q8N130 599 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 PSD4Q8NDX1 1056 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 OR4A15Q8NGL6 344 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 HES7Q9BYE0 225 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 NTNG1Q9Y2I2 539 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 KLF13Q9Y2Y9 288 aaPredicted RBP24.66■■□□□ 1.54
CCM2-211ENST00000478582 RELNP78509 3460 aa24.66■■□□□ 1.54
CCM2-211ENST00000478582 ASH1LQ9NR48 2969 aaKnown RBP24.66■■□□□ 1.54
CCM2-211ENST00000478582 FLNBO75369 2602 aaKnown RBP24.65■■□□□ 1.54
CCM2-211ENST00000478582 PPM1BO75688 479 aa24.65■■□□□ 1.54
CCM2-211ENST00000478582 PRIM2P49643 509 aa24.65■■□□□ 1.54
CCM2-211ENST00000478582 VPS26BQ4G0F5 336 aa24.65■■□□□ 1.54
CCM2-211ENST00000478582 CYP27C1Q4G0S4 372 aa24.65■■□□□ 1.54
CCM2-211ENST00000478582 BHLHB9Q6PI77 547 aa24.65■■□□□ 1.54
CCM2-211ENST00000478582 BLOC1S3Q6QNY0 202 aa24.65■■□□□ 1.54
CCM2-211ENST00000478582 SLC44A2Q8IWA5 706 aaPredicted RBP24.65■■□□□ 1.54
CCM2-211ENST00000478582 PAQR8Q8TEZ7 354 aa24.65■■□□□ 1.54
CCM2-211ENST00000478582 KLHL1Q9NR64 748 aa24.65■■□□□ 1.54
CCM2-211ENST00000478582 AGPAT4Q9NRZ5 378 aa24.65■■□□□ 1.54
CCM2-211ENST00000478582 GPATCH2Q9NW75 528 aa24.65■■□□□ 1.54
CCM2-211ENST00000478582 GIN1Q9NXP7 522 aa24.65■■□□□ 1.54
CCM2-211ENST00000478582 NKX2-2O95096 273 aa24.64■■□□□ 1.54
CCM2-211ENST00000478582 CPSF4O95639 269 aaKnown RBP24.64■■□□□ 1.54
CCM2-211ENST00000478582 HMGN2P05204 90 aaKnown RBP24.64■■□□□ 1.54
CCM2-211ENST00000478582 UQCRC2P22695 453 aa24.64■■□□□ 1.54
CCM2-211ENST00000478582 SEC24CP53992 1094 aa24.64■■□□□ 1.54
CCM2-211ENST00000478582 PLCXD2Q0VAA5 305 aa24.64■■□□□ 1.54
CCM2-211ENST00000478582 RCAN2Q14206 197 aa24.64■■□□□ 1.54
CCM2-211ENST00000478582 SPDYE7PQ495Y7 208 aa24.64■■□□□ 1.54
CCM2-211ENST00000478582 SZRD1Q7Z422 152 aa24.64■■□□□ 1.54
CCM2-211ENST00000478582 GALNTL5Q7Z4T8 443 aa24.64■■□□□ 1.54
CCM2-211ENST00000478582 CPSF7Q8N684 471 aaKnown RBP24.64■■□□□ 1.54
CCM2-211ENST00000478582 OMA1Q96E52 524 aa24.64■■□□□ 1.54
CCM2-211ENST00000478582 SECISBP2Q96T21 854 aaKnown RBP24.64■■□□□ 1.54
CCM2-211ENST00000478582 EQTNQ9NQ60 294 aa24.64■■□□□ 1.54
CCM2-211ENST00000478582 SERHLQ9NQF3 203 aa24.64■■□□□ 1.54
CCM2-211ENST00000478582 MRGBPQ9NV56 204 aa24.64■■□□□ 1.54
CCM2-211ENST00000478582 FLNCQ14315 2725 aa24.64■■□□□ 1.53
CCM2-211ENST00000478582 GMNCA6NCL1 334 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 TP53I11O14683 189 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 SOX30O94993 753 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 CBX6O95503 412 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 MRPL49Q13405 166 aaKnown RBP24.63■■□□□ 1.53
CCM2-211ENST00000478582 GAB1Q13480 694 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 SLC22A10Q63ZE4 541 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 NUP54Q7Z3B4 507 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 PRR22Q8IZ63 422 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 C10orf82Q8WW14 230 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 TMBIM1Q969X1 311 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 SLC35A4Q96G79 324 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 C16orf58Q96GQ5 468 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 PANX1Q96RD7 426 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 RMND5AQ9H871 391 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 Q9N2J8 555 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 SLC52A3Q9NQ40 469 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 CNIH4Q9P003 139 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 CCDC167Q9P0B6 97 aa24.63■■□□□ 1.53
CCM2-211ENST00000478582 CHCHD2Q9Y6H1 151 aaPredicted RBP24.63■■□□□ 1.53
CCM2-211ENST00000478582 PRRC2CQ9Y520 2896 aaKnown RBP24.62■■□□□ 1.53
CCM2-211ENST00000478582 OR6C70A6NIJ9 312 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 TSPAN2O60636 221 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 RASAL1O95294 804 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 ACP2P11117 423 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 FBXW4P57775 412 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 KCNK10P57789 538 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 GNGT1P63211 74 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 TP53BP2Q13625 1128 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 CDC73Q6P1J9 531 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 C6orf120Q7Z4R8 191 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 WDR53Q7Z5U6 358 aaPredicted RBP24.62■■□□□ 1.53
CCM2-211ENST00000478582 SLC16A11Q8NCK7 471 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 FAM13CQ8NE31 585 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 OR10G3Q8NGC4 313 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 OR4N2Q8NGD1 307 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 STACQ99469 402 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 INPP5KQ9BT40 448 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 ACTRT3Q9BYD9 372 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 SACM1LQ9NTJ5 587 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 CBLCQ9ULV8 474 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 OR10H1Q9Y4A9 318 aa24.62■■□□□ 1.53
CCM2-211ENST00000478582 ASPDHA6ND91 283 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 KLRC4-KLRK1H3BQV0 150 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 ABCB7O75027 752 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 KRT16P08779 473 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 CCL3P10147 92 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 CNR1P21554 472 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 GABRA3P34903 492 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 SOAT1P35610 550 aa24.61■■□□□ 1.53
CCM2-211ENST00000478582 PNLIPRP2P54317 469 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms