RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 HDXQ7Z353 690 aa14.29□□□□□ -0.12
HMGA1-206ENST00000478214 OR4N2Q8NGD1 307 aa14.29□□□□□ -0.12
HMGA1-206ENST00000478214 ZFP28Q8NHY6 868 aa14.29□□□□□ -0.12
HMGA1-206ENST00000478214 ATP6V1G3Q96LB4 118 aa14.29□□□□□ -0.12
HMGA1-206ENST00000478214 COL21A1Q96P44 957 aa14.29□□□□□ -0.12
HMGA1-206ENST00000478214 ADOQ96SZ5 270 aa14.29□□□□□ -0.12
HMGA1-206ENST00000478214 MANSC1Q9H8J5 431 aa14.29□□□□□ -0.12
HMGA1-206ENST00000478214 ASIC5Q9NY37 505 aa14.29□□□□□ -0.12
HMGA1-206ENST00000478214 EML6Q6ZMW3 1958 aa14.29□□□□□ -0.12
HMGA1-206ENST00000478214 A1L4Q6 167 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 TSPAN2O60636 221 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 SNX4O95219 450 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 IGHG3P01860 377 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 IFI6P09912 130 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 DDX5P17844 614 aaKnown RBP14.28□□□□□ -0.12
HMGA1-206ENST00000478214 DIO3P55073 304 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 SLC10A1Q14973 349 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 SMU1Q2TAY7 513 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 CPTPQ5TA50 214 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 FNDC7Q5VTL7 733 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 TMEM198Q66K66 360 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 ARHGAP11AQ6P4F7 1023 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 PAOXQ6QHF9 649 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 DOLPP1Q86YN1 238 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 TRIM42Q8IWZ5 723 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 RIMKLAQ8IXN7 391 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 RAB3IL1Q8TBN0 382 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 NTNG2Q96CW9 530 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 ZNF597Q96LX8 424 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 ZNF703Q9H7S9 590 aaPredicted RBP14.28□□□□□ -0.12
HMGA1-206ENST00000478214 METTL7AQ9H8H3 244 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 MEAF6Q9HAF1 191 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 EQTNQ9NQ60 294 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 NOP53Q9NZM5 478 aaKnown RBP14.28□□□□□ -0.12
HMGA1-206ENST00000478214 MARCOQ9UEW3 520 aaPredicted RBP14.28□□□□□ -0.12
HMGA1-206ENST00000478214 ICE1Q9Y2F5 2266 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 OR10H1Q9Y4A9 318 aa14.28□□□□□ -0.12
HMGA1-206ENST00000478214 A0A1W2PRB8 838 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 C2orf72A6NCS6 295 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 OR6C70A6NIJ9 312 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 PRRG2O14669 202 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 TPOP07202 933 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 KITP10721 976 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 PRPS1L1P21108 318 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 KRT20P35900 424 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 PTGDSP41222 190 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 MASP1P48740 699 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 PRKAG1P54619 331 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 CLDN8P56748 225 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 OCRLQ01968 901 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 GAB1Q13480 694 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 C3P1Q6ZMU1 363 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 LARP4Q71RC2 724 aaKnown RBP eCLIP14.27□□□□□ -0.132e-17■□□□□ 10.8
HMGA1-206ENST00000478214 TRILQ7L0X0 811 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 SZRD1Q7Z422 152 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 PACS2Q86VP3 889 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 NUP43Q8NFH3 380 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 FAM57AQ8TBR7 257 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 ZNF75CPQ92670 426 aaPredicted RBP14.27□□□□□ -0.13
HMGA1-206ENST00000478214 EFHD2Q96C19 240 aaPredicted RBP14.27□□□□□ -0.13
HMGA1-206ENST00000478214 COQ8BQ96D53 544 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 SLC35A4Q96G79 324 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 CCDC120Q96HB5 630 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 SH3GL2Q99962 352 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 LMF2Q9BU23 707 aaKnown RBP14.27□□□□□ -0.13
HMGA1-206ENST00000478214 VIPAS39Q9H9C1 493 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 GALNT9Q9HCQ5 603 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 SIRT3Q9NTG7 399 aaPredicted RBP14.27□□□□□ -0.13
HMGA1-206ENST00000478214 NTMQ9P121 344 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 ZNF407Q9C0G0 2248 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 MYO7BQ6PIF6 2116 aa14.27□□□□□ -0.13
HMGA1-206ENST00000478214 NINQ8N4C6 2090 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 PRAMEF25A6NGN4 478 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 NPIPA2E9PIF3 369 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 NPIPA3F8WFD2 350 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 SDHDO14521 159 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 GNB5O14775 395 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 HDAC3O15379 428 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 EMC8O43402 210 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 ABCB7O75027 752 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 ICOSLGO75144 302 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 LBPP18428 481 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 IL12BP29460 328 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 C21orf58P58505 322 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 PSPHP78330 225 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 MLC1Q15049 377 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 ZNHIT3Q15649 155 aaPredicted RBP14.26□□□□□ -0.13
HMGA1-206ENST00000478214 SLC30A6Q6NXT4 461 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 TMEM81Q6P7N7 255 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 NCCRP1Q6ZVX7 275 aaPredicted RBP14.26□□□□□ -0.13
HMGA1-206ENST00000478214 CD163Q86VB7 1156 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 WDR75Q8IWA0 830 aaKnown RBP14.26□□□□□ -0.13
HMGA1-206ENST00000478214 OR5P2Q8WZ92 322 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 TMCO6Q96DC7 493 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 TMEM41AQ96HV5 264 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 GNRHR2Q96P88 292 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 PHF12Q96QT6 1004 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 PRPF18Q99633 342 aaKnown RBP14.26□□□□□ -0.13
HMGA1-206ENST00000478214 OSBPL11Q9BXB4 747 aa14.26□□□□□ -0.13
HMGA1-206ENST00000478214 LDAHQ9H6V9 325 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms