RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 NFU1Q9UMS0 254 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 EXO1Q9UQ84 846 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 OSGIN2Q9Y236 505 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 PRELID3BQ9Y3B1 194 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 TBL2Q9Y4P3 447 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 ADGRB2O60241 1585 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 GLI3P10071 1580 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 TECPR2O15040 1411 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 CPSF1Q10570 1443 aaKnown RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 SPATA31E1Q6ZUB1 1445 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 RGPD8O14715 1765 aaPredicted RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 NRAPQ86VF7 1730 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 TRAV26-1A0A087WT03 109 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 C5orf60A6NFR6 353 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 RFPL4AA6NLU0 287 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 A8MUA0 341 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 VWC2LB2RUY7 222 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 TMEM233B4DJY2 109 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 RFPL4AL1F8VTS6 287 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 H3BMM5 538 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 PPP6CO00743 305 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 TXNDC9O14530 226 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 ABCD4O14678 606 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 OGG1O15527 345 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 HSF2BPO75031 334 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 SDC3O75056 442 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 WDR47O94967 919 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 NXPH3O95157 252 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 WDPCPO95876 746 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 TOP3BO95985 862 aaKnown RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 MT-ND1P03886 318 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 CHRNGP07510 517 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 DCNP07585 359 aaKnown RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 ADRB3P13945 408 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 GFAPP14136 432 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 PRF1P14222 555 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 GNAZP19086 355 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 KCNA3P22001 575 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 ME2P23368 584 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 DNASE1P24855 282 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 S100PP25815 95 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 PPP2R1BP30154 601 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 FCGR2BP31994 310 aaPredicted RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 MMP13P45452 471 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 GPR12P47775 334 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 RARRES1P49788 294 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 RPL14P50914 215 aaKnown RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 RAB13P51153 203 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 MMP15P51511 669 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 CNN1P51911 297 aaKnown RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 NKX2-5P52952 324 aaPredicted RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 OR2B6P58173 313 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 PTENP60484 403 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 PSME3P61289 254 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 BDH1Q02338 343 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 CHRNB3Q05901 458 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 RBPJQ06330 500 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 TNFRSF9Q07011 255 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 MED21Q13503 144 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 DPYSL3Q14195 570 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 FLOT2Q14254 428 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 GRM4Q14833 912 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 TMED2Q15363 201 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 EFNB3Q15768 340 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 UGCGQ16739 394 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 EXOC3L4Q17RC7 722 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 ALKBH6Q3KRA9 238 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 ACCSLQ4AC99 568 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 CBWD6Q4V339 395 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 IFI44LQ53G44 452 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 KLHL12Q53G59 568 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 C5orf47Q569G3 176 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 PAN3Q58A45 887 aaKnown RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 EARS2Q5JPH6 523 aaKnown RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 CBWD3Q5JTY5 395 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 CTSL3PQ5NE16 218 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 ZNF618Q5T7W0 954 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 IRAK1BP1Q5VVH5 260 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 ALS2CLQ60I27 953 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 PMS2CLQ68D20 193 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 TCEAL6Q6IPX3 200 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 ADNP2Q6IQ32 1131 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 FAM199XQ6PEV8 388 aaPredicted RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 BHLHB9Q6PI77 547 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 CERS6Q6ZMG9 384 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 GLDNQ6ZMI3 551 aaPredicted RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 TMEM182Q6ZP80 229 aaPredicted RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 SSX9Q7RTT3 188 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 PEG10Q86TG7 708 aaKnown RBP3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 DTX2Q86UW9 622 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 HORMAD1Q86X24 394 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 ADHFE1Q8IWW8 467 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 GPALPP1Q8IXQ4 340 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 C4orf19Q8IY42 314 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 YAF2Q8IY57 180 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 ZNF100Q8IYN0 542 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 PRSS58Q8IYP2 241 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 ZNF34Q8IZ26 560 aa3.28□□□□□ -1.88
FNDC3B-209ENST00000478016 STK40Q8N2I9 435 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms