RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 H0YC42 278 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 PLOD3O60568 738 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 DIAPH2O60879 1101 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 REM1O75628 298 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 ESRRBO95718 433 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 ACTL6AO96019 429 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 KRT6AP02538 564 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 KRT6BP04259 564 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 ABHD2P08910 425 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 RHOXF2BP0C7M4 288 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 EPXP11678 715 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 HSD3B1P14060 373 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 DRD2P14416 443 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 CD1EP15812 388 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 ZNF708P17019 499 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 KRT15P19012 456 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 ATP5F1P24539 256 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-207ENST00000475549 TACR1P25103 407 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 HSD3B2P26439 372 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 KRT6CP48668 564 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 ASCL1P50553 236 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 TPD52P55327 224 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-207ENST00000475549 CLDN18P56856 261 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 DCAF7P61962 342 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 RPP38P78345 283 aaKnown RBP6.37□□□□□ -1.39
HDAC3-207ENST00000475549 PSG6Q00889 435 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 PLCXD2Q0VAA5 305 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 LCP2Q13094 533 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 SLC29A2Q14542 456 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 RASA2Q15283 850 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 FLYWCH1Q4VC44 716 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 GPRIN3Q6ZVF9 776 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 PLCZ1Q86YW0 608 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 PM20D2Q8IYS1 436 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 LRRN4CLQ8ND94 238 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 FAM222BQ8WU58 562 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 NINJ1Q92982 152 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 COL21A1Q96P44 957 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 FAIM2Q9BWQ8 316 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 OSBPL11Q9BXB4 747 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 EBPLQ9BY08 206 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 C12orf65Q9H3J6 166 aaKnown RBP6.37□□□□□ -1.39
HDAC3-207ENST00000475549 GSTO2Q9H4Y5 243 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 FOLH1BQ9HBA9 442 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 SLC35C2Q9NQQ7 365 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 TAS2R10Q9NYW0 307 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 KLRF1Q9NZS2 232 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 PRODH2Q9UF12 536 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 PSME2Q9UL46 239 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 CFL2Q9Y281 166 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 CCL27Q9Y4X3 112 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 ZNF780BQ9Y6R6 833 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 C2CD3Q4AC94 2353 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 DNAJC13O75165 2243 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 HCFC1P51610 2035 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 GNG14A0A1W2PPG7 69 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 SERTM1A2A2V5 107 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 CLCA1A8K7I4 914 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 A8MXE2 369 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 UPK1AO00322 258 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 PCDH7O60245 1069 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 FADS1O60427 444 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 CDH16O75309 829 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 ERN1O75460 977 aaKnown RBP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 TNFSF13O75888 250 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 RCBTB2O95199 551 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 ATE1O95260 518 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 PSMG1O95456 288 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 IL18BPO95998 194 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 ANXA4P09525 319 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 CD99P14209 185 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 DDCP20711 480 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 SRD5A2P31213 254 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 TIA1P31483 386 aaKnown RBP eCLIP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 OPRM1P35372 400 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 SUCLG1P53597 346 aaKnown RBP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 ADAM8P78325 824 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 BTKQ06187 659 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 CSTF3Q12996 717 aaKnown RBP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 GAB1Q13480 694 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 KIAA0040Q15053 153 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 FAM71E1Q6IPT2 247 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 C22orf34Q6ZV56 151 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 LARP4Q71RC2 724 aaKnown RBP eCLIP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 TRMT10CQ7L0Y3 403 aaKnown RBP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 TAOK1Q7L7X3 1001 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 TRIM46Q7Z4K8 759 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 TGIF2LYQ8IUE0 185 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 SLC44A2Q8IWA5 706 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 GBP7Q8N8V2 638 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 MNS1Q8NEH6 495 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 OR14L1PQ8NHC6 308 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 WNT2BQ93097 391 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 EFHD2Q96C19 240 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 INTS12Q96CB8 462 aaKnown RBP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 TMCO6Q96DC7 493 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 ERP27Q96DN0 273 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 MTBPQ96DY7 904 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 GSX1Q9H4S2 264 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms