RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 VPS33BQ9H267 617 aa4.56□□□□□ -1.68
SDHB-205ENST00000475506 IL1RL2Q9HB29 575 aa4.56□□□□□ -1.68
SDHB-205ENST00000475506 FGF22Q9HCT0 170 aa4.56□□□□□ -1.68
SDHB-205ENST00000475506 DEPPQ9NTK1 212 aa4.56□□□□□ -1.68
SDHB-205ENST00000475506 UTP6Q9NYH9 597 aaKnown RBP4.56□□□□□ -1.68
SDHB-205ENST00000475506 EXOGQ9Y2C4 368 aaKnown RBP4.56□□□□□ -1.68
SDHB-205ENST00000475506 CARMIL1Q5VZK9 1371 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 SALL1Q9NSC2 1324 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 MEX3AA1L020 520 aaKnown RBP4.55□□□□□ -1.68
SDHB-205ENST00000475506 MBLAC1A4D2B0 266 aaPredicted RBP4.55□□□□□ -1.68
SDHB-205ENST00000475506 ZSCAN5BA6NJL1 495 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 ARHGEF33A8MVX0 844 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 CLDN5O00501 218 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 DUX1O43812 170 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 EFNA2O43921 213 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 SNNO75324 88 aaPredicted RBP4.55□□□□□ -1.68
SDHB-205ENST00000475506 ZNF432O94892 652 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 IL1BP01584 269 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 CFC1BP0CG36 223 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 CFC1P0CG37 223 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 ANOS1P23352 680 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 SULT1E1P49888 294 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 CHI3L2Q15782 390 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 GDPGP1Q6ZNW5 385 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 MOB2Q70IA6 237 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 PRSS48Q7RTY5 328 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 DPY19L4Q7Z388 723 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 ZNF491Q8N8L2 437 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 C9orf106Q8NAJ2 232 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 OR8J1Q8NGP2 316 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 RNF139Q8WU17 664 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 SPRYD4Q8WW59 207 aaPredicted RBP4.55□□□□□ -1.68
SDHB-205ENST00000475506 RLN3Q8WXF3 142 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 TTYH2Q9BSA4 534 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 PARLQ9H300 379 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 ZNF696Q9H7X3 374 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 LRRC40Q9H9A6 602 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 ELOVL3Q9HB03 270 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 DCAF13Q9NV06 445 aaKnown RBP4.55□□□□□ -1.68
SDHB-205ENST00000475506 KLRF1Q9NZS2 232 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 THYN1Q9P016 225 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 CLEC4AQ9UMR7 237 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 RNF6Q9Y252 685 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 SLC9A8Q9Y2E8 581 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 GSTK1Q9Y2Q3 226 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 FBXO7Q9Y3I1 522 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 OR10H1Q9Y4A9 318 aa4.55□□□□□ -1.68
SDHB-205ENST00000475506 DDX49Q9Y6V7 483 aaKnown RBP4.55□□□□□ -1.68
SDHB-205ENST00000475506 LOC105371242A0A075B767 164 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 EME2A4GXA9 379 aaPredicted RBP4.54□□□□□ -1.68
SDHB-205ENST00000475506 KRTAP29-1A8MX34 341 aaPredicted RBP4.54□□□□□ -1.68
SDHB-205ENST00000475506 NR5A2O00482 541 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 NUDT21O43809 227 aaKnown RBP4.54□□□□□ -1.68
SDHB-205ENST00000475506 SNAP91O60641 907 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 B3GAT3O94766 335 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 RHOBTB1O94844 696 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 TPM2P07951 284 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 XRCC1P18887 633 aaPredicted RBP4.54□□□□□ -1.68
SDHB-205ENST00000475506 PPT1P50897 306 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 TNFRSF17Q02223 184 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 HYAL1Q12794 435 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 FASTKQ14296 549 aaKnown RBP4.54□□□□□ -1.68
SDHB-205ENST00000475506 MAPK6Q16659 721 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 TPD52L1Q16890 204 aaPredicted RBP4.54□□□□□ -1.68
SDHB-205ENST00000475506 CCDC183Q5T5S1 534 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 WLSQ5T9L3 541 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 PMF1Q6P1K2 205 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 ARHGAP11AQ6P4F7 1023 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 BTNL3Q6UXE8 466 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 CYS1Q717R9 158 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 LRRC70Q7Z2Q7 622 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 NUFIP2Q7Z417 695 aaKnown RBP4.54□□□□□ -1.68
SDHB-205ENST00000475506 OR52J3Q8NH60 311 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 SPPL2AQ8TCT8 520 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 C18orf25Q96B23 403 aaPredicted RBP4.54□□□□□ -1.68
SDHB-205ENST00000475506 AKR1E2Q96JD6 320 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 SLC25A51Q9H1U9 297 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 RAB18Q9NP72 206 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 DUS2Q9NX74 493 aaKnown RBP4.54□□□□□ -1.68
SDHB-205ENST00000475506 NAALAD2Q9Y3Q0 740 aa4.54□□□□□ -1.68
SDHB-205ENST00000475506 METP08581 1390 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 NPIPA5A0A0B4J1W7 369 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 PPIAL4CA0A0B4J2A2 164 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 NPIPA5E9PKD4 350 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 AP3B1O00203 1094 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 CASKO14936 926 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 PDE5AO76074 875 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 IGHG1P01857 330 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 OPN1LWP04000 364 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 IGF1P05019 195 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 HOXB7P09629 217 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 PPIAL4GP0DN37 164 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 ANXA3P12429 323 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 PCMT1P22061 227 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 GSCP56915 257 aaPredicted RBP4.53□□□□□ -1.68
SDHB-205ENST00000475506 ZNF146Q15072 292 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 TATDN3Q17R31 274 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 MTHFSDQ2M296 383 aaKnown RBP4.53□□□□□ -1.68
SDHB-205ENST00000475506 KRTAP24-1Q3LI83 254 aa4.53□□□□□ -1.68
SDHB-205ENST00000475506 SEL1L2Q5TEA6 688 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms