RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 FOLH1BQ9HBA9 442 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 SH2D2AQ9NP31 389 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 GIMAP4Q9NUV9 329 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 TMEM45AQ9NWC5 275 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 FAM120CQ9NX05 1096 aaKnown RBP6.45□□□□□ -1.38
LIMD1-204ENST00000474665 TAS2R9Q9NYW1 312 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 STMN3Q9NZ72 180 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 ARMCX1Q9P291 453 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 MAP10Q9P2G4 905 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 BTNL2Q9UIR0 455 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 KCNE3Q9Y6H6 103 aa6.45□□□□□ -1.38
LIMD1-204ENST00000474665 NIPBLQ6KC79 2804 aaeCLIP6.44□□□□□ -1.38
LIMD1-204ENST00000474665 TRBV5-3A0A0A0MS03 114 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 C2orf92A0A1B0GVN3 265 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 GXYLT2A0PJZ3 443 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 PRAMEF27A3QJZ7 478 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 OR6C76A6NM76 312 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 MKRN2OSH3BPM6 223 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 NR5A2O00482 541 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 FCHO1O14526 889 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 TO15178 435 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 EMC8O43402 210 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 PRAMEF2O60811 474 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 ITGA10O75578 1167 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 NEURL1O76050 574 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 WISP2O76076 250 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 SLITRK5O94991 958 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 CPSF4O95639 269 aaKnown RBP6.44□□□□□ -1.38
LIMD1-204ENST00000474665 IGKV1D-16P01601 117 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 ALPPP05187 535 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 IL6P05231 212 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 GSNP06396 782 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 ABCB1P08183 1280 aaPredicted RBP6.44□□□□□ -1.38
LIMD1-204ENST00000474665 ACP2P11117 423 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 SOX3P41225 446 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 PPICP45877 212 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 CCT3P49368 545 aaKnown RBP6.44□□□□□ -1.38
LIMD1-204ENST00000474665 TNFSF10P50591 281 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 RPS26P62854 115 aaKnown RBP6.44□□□□□ -1.38
LIMD1-204ENST00000474665 KLF10Q13118 480 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 TUBA3CQ13748 450 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 NNATQ16517 81 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 DPY19L1Q2PZI1 675 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 ZNF791Q3KP31 576 aaPredicted RBP6.44□□□□□ -1.38
LIMD1-204ENST00000474665 PLEKHN1Q494U1 663 aaPredicted RBP6.44□□□□□ -1.38
LIMD1-204ENST00000474665 NADK2Q4G0N4 442 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 ABHD17BQ5VST6 288 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 SPINK14Q6IE38 97 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 MFSD12Q6NUT3 480 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 TUBA3EQ6PEY2 450 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 SLC2A7Q6PXP3 512 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 DLEU7Q6UYE1 221 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 SPNS3Q6ZMD2 512 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 ASB18Q6ZVZ8 466 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 MDGA2Q7Z553 956 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 ZAR1Q86SH2 424 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 MTDHQ86UE4 582 aaKnown RBP6.44□□□□□ -1.38
LIMD1-204ENST00000474665 C10orf111Q8N326 155 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 SLC5A8Q8N695 610 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 Q8NA96 180 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 SLC16A11Q8NCK7 471 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 MDS2Q8NDY4 140 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 C17orf47Q8NEP4 570 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 OR5AK3PQ8NH89 298 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 HAS2Q92819 552 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 NTNG2Q96CW9 530 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 SPDL1Q96EA4 605 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 OTUB1Q96FW1 271 aaPredicted RBP6.44□□□□□ -1.38
LIMD1-204ENST00000474665 AURKBQ96GD4 344 aaPredicted RBP6.44□□□□□ -1.38
LIMD1-204ENST00000474665 ART5Q96L15 291 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 ZNF354BQ96LW1 612 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 SIGLEC12Q96PQ1 595 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 GAL3ST4Q96RP7 486 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 MDFIQ99750 246 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 LMF2Q9BU23 707 aaKnown RBP6.44□□□□□ -1.38
LIMD1-204ENST00000474665 CCDC106Q9BWC9 280 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 HES7Q9BYE0 225 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 PAIP1Q9H074 479 aaKnown RBP6.44□□□□□ -1.38
LIMD1-204ENST00000474665 RNF32Q9H0A6 362 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 IKZF5Q9H5V7 419 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 PROK2Q9HC23 129 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 ATAD3AQ9NVI7 634 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 FBXO34Q9NWN3 711 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 ANKRD10Q9NXR5 420 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 SLC25A37Q9NYZ2 338 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 CCDC167Q9P0B6 97 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 COPS7AQ9UBW8 275 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 BCAP29Q9UHQ4 241 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 MAPRE3Q9UPY8 281 aa6.44□□□□□ -1.38
LIMD1-204ENST00000474665 AKAP9Q99996 3911 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 ALPK2Q86TB3 2170 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 A0A0G2JMM0 328 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 A0A1W2PP18 115 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 A0A1W2PPB8 328 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 A0A1W2PRS3 328 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 FRG2CA6NGY1 282 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 CCDC154A6NI56 674 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 KIR3DP1A8MWS1 328 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 CAPN14A8MX76 684 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 B4DXG7 233 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms