RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 KMT2EQ8IZD2 1858 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 DSPPQ9NZW4 1301 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 NUP210LQ5VU65 1888 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 GADD45GO95257 159 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 RECKO95980 971 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 GABRA3P34903 492 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 IL1RL1Q01638 556 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 GANABQ14697 944 aaKnown RBP18.45■□□□□ 0.54
SSR1-204ENST00000474597 DCST2Q5T1A1 773 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 ANKRD34AQ69YU3 496 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 PEX5LQ8IYB4 626 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 GIPC3Q8TF64 312 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 PHF10Q8WUB8 498 aaKnown RBP18.45■□□□□ 0.54
SSR1-204ENST00000474597 APOBEC4Q8WW27 367 aaKnown RBP18.45■□□□□ 0.54
SSR1-204ENST00000474597 SDF2Q99470 211 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 BARD1Q99728 777 aaKnown RBP18.45■□□□□ 0.54
SSR1-204ENST00000474597 MTHFD2LQ9H903 347 aaPredicted RBP18.45■□□□□ 0.54
SSR1-204ENST00000474597 MKLN1Q9UL63 735 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 IFT52Q9Y366 437 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 CLDN16Q9Y5I7 305 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 RALGAPA1Q6GYQ0 2036 aa18.45■□□□□ 0.54
SSR1-204ENST00000474597 DYRK3O43781 588 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 FCMRO60667 390 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 PRAMEF2O60811 474 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 STX11O75558 287 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 CDH2P19022 906 aaPredicted RBP18.44■□□□□ 0.54
SSR1-204ENST00000474597 MYF6P23409 242 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 SSTR4P31391 388 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 GALNSP34059 522 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 POU6F2P78424 691 aaPredicted RBP18.44■□□□□ 0.54
SSR1-204ENST00000474597 BLMHQ13867 455 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 EXOSC6Q5RKV6 272 aaKnown RBP18.44■□□□□ 0.54
SSR1-204ENST00000474597 CCNJQ5T5M9 372 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 TTC23Q5W5X9 447 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 RHBDD2Q6NTF9 364 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 FRRS1Q6ZNA5 592 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 QSOX2Q6ZRP7 698 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 MED25Q71SY5 747 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 TAGAPQ8N103 731 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 CHDHQ8NE62 594 aaPredicted RBP18.44■□□□□ 0.54
SSR1-204ENST00000474597 OR52P1PQ8NH57 321 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 PIK3R3Q92569 461 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 FBXL20Q96IG2 436 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 SOX17Q9H6I2 414 aaPredicted RBP18.44■□□□□ 0.54
SSR1-204ENST00000474597 FOLH1BQ9HBA9 442 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 MKKSQ9NPJ1 570 aaPredicted RBP18.44■□□□□ 0.54
SSR1-204ENST00000474597 BATF3Q9NR55 127 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 PNO1Q9NRX1 252 aaKnown RBP18.44■□□□□ 0.54
SSR1-204ENST00000474597 PNPLA3Q9NST1 481 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 ZNF232Q9UNY5 417 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 ERVK-19Q9WJR5 959 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 PCDHGB2Q9Y5G2 931 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 HEMK1Q9Y5R4 338 aaPredicted RBP18.44■□□□□ 0.54
SSR1-204ENST00000474597 M0R3H8 397 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 TNFAIP8O95379 198 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 LGI1O95970 557 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 GNAO1P09471 354 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 S1PR1P21453 382 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 CSTF2P33240 577 aaKnown RBP eCLIP18.44■□□□□ 0.54
SSR1-204ENST00000474597 ADARB1P78563 741 aaKnown RBP18.44■□□□□ 0.54
SSR1-204ENST00000474597 GPR68Q15743 365 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 VRK2Q86Y07 508 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 CLIP3Q96DZ5 547 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 KLHL28Q9NXS3 571 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 FTSJ1Q9UET6 329 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 PCDHGB5Q9Y5G0 923 aa18.44■□□□□ 0.54
SSR1-204ENST00000474597 BDP1A6H8Y1 2624 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 D6RAR5 112 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 SYT5O00445 386 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 FLRT2O43155 660 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 SCRG1O75711 98 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 DAPP51397 102 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 LARS2Q15031 903 aaKnown RBP18.43■□□□□ 0.54
SSR1-204ENST00000474597 EXOC3L2Q2M3D2 409 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 COLEC12Q5KU26 742 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 KDM4DQ6B0I6 523 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 TYW3Q6IPR3 259 aaKnown RBP18.43■□□□□ 0.54
SSR1-204ENST00000474597 GALNT5Q7Z7M9 940 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 ZNF605Q86T29 641 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 RHBDD1Q8TEB9 315 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 RSPO3Q9BXY4 272 aaPredicted RBP18.43■□□□□ 0.54
SSR1-204ENST00000474597 ZNF350Q9GZX5 532 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 KRT84Q9NSB2 600 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 RHCGQ9UBD6 479 aa18.43■□□□□ 0.54
SSR1-204ENST00000474597 TMEFF2Q9UIK5 374 aaPredicted RBP18.43■□□□□ 0.54
SSR1-204ENST00000474597 FAM86C2PA6NEL3 165 aa18.42■□□□□ 0.54
SSR1-204ENST00000474597 C17orf105B2RV13 164 aa18.42■□□□□ 0.54
SSR1-204ENST00000474597 NTN3O00634 580 aaPredicted RBP18.42■□□□□ 0.54
SSR1-204ENST00000474597 GALR2O43603 387 aaPredicted RBP18.42■□□□□ 0.54
SSR1-204ENST00000474597 HYAL3O43820 417 aaPredicted RBP18.42■□□□□ 0.54
SSR1-204ENST00000474597 NKX2-2O95096 273 aa18.42■□□□□ 0.54
SSR1-204ENST00000474597 CLIC3O95833 236 aa18.42■□□□□ 0.54
SSR1-204ENST00000474597 IL7RP16871 459 aa18.42■□□□□ 0.54
SSR1-204ENST00000474597 PRKAR1BP31321 381 aa18.42■□□□□ 0.54
SSR1-204ENST00000474597 MAP3K8P41279 467 aa18.42■□□□□ 0.54
SSR1-204ENST00000474597 EMDP50402 254 aa18.42■□□□□ 0.54
SSR1-204ENST00000474597 TPD52P55327 224 aaPredicted RBP18.42■□□□□ 0.54
SSR1-204ENST00000474597 SMIM11AP58511 58 aa18.42■□□□□ 0.54
SSR1-204ENST00000474597 DUSP8Q13202 625 aa18.42■□□□□ 0.54
SSR1-204ENST00000474597 KCNAB2Q13303 367 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms