RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PPP1R3EQ9H7J1 279 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 SYNPO2LQ9H987 977 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 B3GAT2Q9NPZ5 323 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 ACOXLQ9NUZ1 547 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 NTNG1Q9Y2I2 539 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 ALG5Q9Y673 324 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 PGRMC2O15173 223 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 CPNE3O75131 537 aaKnown RBP19.84■□□□□ 0.77
COL18A1-207ENST00000473212 CLCNKAP51800 687 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 CHRNEQ04844 493 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 INSL4Q14641 139 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 NDUFAF5Q5TEU4 345 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 SLC27A4Q6P1M0 643 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 MRPL43Q8N983 215 aaKnown RBP19.84■□□□□ 0.77
COL18A1-207ENST00000473212 AMDHD1Q96NU7 426 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 TMED9Q9BVK6 235 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 HDHD5Q9BXW7 423 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 TBC1D17Q9HA65 648 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 CNIH4Q9P003 139 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 A0A087WUU8 490 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 CLTBP09497 229 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 ALAS2P22557 587 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 CAMK2BQ13554 666 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 IL18Q14116 193 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 MINDY4Q4G0A6 757 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 LINC00471Q8N535 108 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 ZNF557Q8N988 423 aaPredicted RBP19.83■□□□□ 0.77
COL18A1-207ENST00000473212 OR7G1Q8NGA0 311 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 OR5K2Q8NHB8 316 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 GRPEL2Q8TAA5 225 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 QRFPRQ96P65 431 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 ACSS1Q9NUB1 689 aaPredicted RBP19.83■□□□□ 0.77
COL18A1-207ENST00000473212 GIMAP4Q9NUV9 329 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 NLKQ9UBE8 527 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 GPR34Q9UPC5 381 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 CLCA2Q9UQC9 943 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 GPR55Q9Y2T6 319 aaPredicted RBP19.83■□□□□ 0.77
COL18A1-207ENST00000473212 EXOSC1Q9Y3B2 195 aaKnown RBP19.83■□□□□ 0.77
COL18A1-207ENST00000473212 OR1A2Q9Y585 309 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 SCN2AQ99250 2005 aa19.83■□□□□ 0.77
COL18A1-207ENST00000473212 HCN1O60741 890 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 CH25HO95992 272 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 FGF9P31371 208 aaPredicted RBP19.83■□□□□ 0.76
COL18A1-207ENST00000473212 CCR8P51685 355 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 NCBP2P52298 156 aaKnown RBP eCLIP19.83■□□□□ 0.76
COL18A1-207ENST00000473212 DUSP6Q16828 381 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 HNRNPA1L2Q32P51 320 aaKnown RBP19.83■□□□□ 0.76
COL18A1-207ENST00000473212 CCDC58Q4VC31 144 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 PRICKLE2Q7Z3G6 844 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 CADM2Q8N3J6 435 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 HCAR2Q8TDS4 363 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 RGMAQ96B86 450 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 NECTIN4Q96NY8 510 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 CFHR5Q9BXR6 569 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 ISYNA1Q9NPH2 558 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 RBFOX1Q9NWB1 397 aaKnown RBP19.83■□□□□ 0.76
COL18A1-207ENST00000473212 IL20RAQ9UHF4 553 aa19.83■□□□□ 0.76
COL18A1-207ENST00000473212 SNTNA6NMZ2 147 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 GSTM3P21266 225 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 FAPQ12884 760 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 TCTE3Q8IZS6 198 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 OR4F15Q8NGB8 312 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 OR8D1Q8WZ84 308 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 ZNF514Q96K75 400 aaPredicted RBP19.82■□□□□ 0.76
COL18A1-207ENST00000473212 ATF6BQ99941 703 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 SOSTQ9BQB4 213 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 TRMT61BQ9BVS5 477 aaKnown RBP19.82■□□□□ 0.76
COL18A1-207ENST00000473212 PELI2Q9HAT8 420 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 EQTNQ9NQ60 294 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 IRAK3Q9Y616 596 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 SHISA3A0PJX4 238 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 IRGMA1A4Y4 181 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 UBXN7O94888 489 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 P2RY2P41231 377 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 SSR2P43308 183 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 CSNK1G2P78368 415 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 REEP5Q00765 189 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 UBE3AQ05086 875 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 DPTQ07507 201 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 ZNF234Q14588 700 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 TCEA2Q15560 299 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 CD200R1LQ6Q8B3 271 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 CCDC116Q8IYX3 515 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 TMEM145Q8NBT3 493 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 OR8K5Q8NH50 307 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 CXXC1Q9P0U4 656 aaPredicted RBP19.82■□□□□ 0.76
COL18A1-207ENST00000473212 PLEKHM1Q9Y4G2 1056 aa19.82■□□□□ 0.76
COL18A1-207ENST00000473212 TRDV1A0A1B0GX56 115 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 IGLON5A6NGN9 336 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 FAM170BA6NMN3 283 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 HLA-DQB1P01920 261 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 HMGN2P05204 90 aaKnown RBP19.81■□□□□ 0.76
COL18A1-207ENST00000473212 DDX6P26196 483 aaKnown RBP eCLIP19.81■□□□□ 0.76
COL18A1-207ENST00000473212 SLC1A3P43003 542 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 AVPR1BP47901 424 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 GNG2P59768 71 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 DGLUCYQ7Z3D6 616 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 MARCH9Q86YJ5 346 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 C12orf76Q8N812 135 aaPredicted RBP19.81■□□□□ 0.76
COL18A1-207ENST00000473212 ZNF485Q8NCK3 441 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms