RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 MS4A15Q8N5U1 240 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 CLRN3Q8NCR9 226 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 FANK1Q8TC84 345 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 KCNJ9Q92806 393 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 RIT1Q92963 219 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 ESAMQ96AP7 390 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 TPD52L3Q96J77 140 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 NTMT1Q9BV86 223 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 THSD1Q9NS62 852 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 CFAP97Q9P2B7 532 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 NDOR1Q9UHB4 597 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 PFDN2Q9UHV9 154 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 PCOLCE2Q9UKZ9 415 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 CYP8B1Q9UNU6 501 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 MEIKINA0A087WXM9 373 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 IRGMA1A4Y4 181 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 TBC1D3BA6NDS4 549 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 A8MXK9 166 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 NPIPB8E9PQR5 432 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 CBX4O00257 560 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 FPGTO14772 594 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 SGTAO43765 313 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 MPC2O95563 127 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 ADH5P11766 374 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 DNASE1P24855 282 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 SSTR4P31391 388 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 CDKN2CP42773 168 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 PIK3CGP48736 1102 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 HMGA2P52926 109 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 GPR85P60893 370 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 SELENOWP63302 87 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 SPIBQ01892 262 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 GOLGA4Q13439 2230 aaKnown RBP9.52□□□□□ -0.88
APTX-216ENST00000472896 SNAPC1Q16533 368 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 PTPRNQ16849 979 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 IFI44LQ53G44 452 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 SPIN4Q56A73 249 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 ETFBKMTQ8IXQ9 262 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 UMODL1-AS1Q8N2C9 162 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 OR11H7Q8NGC8 314 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 OR11H4Q8NGC9 324 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 OR2T4Q8NH00 348 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 ARRDC2Q8TBH0 407 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 CD200R1Q8TD46 325 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 UBTD2Q8WUN7 234 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 EEF1AKMT1Q8WVE0 214 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 ACOT12Q8WYK0 555 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 WBP2Q969T9 261 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 LINC00052Q96N35 136 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 SMOQ99835 787 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 NIPSNAP1Q9BPW8 284 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 KATNB1Q9BVA0 655 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 OR51J1Q9H342 316 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 FANCFQ9NPI8 374 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 ZNF275Q9NSD4 429 aaPredicted RBP9.52□□□□□ -0.88
APTX-216ENST00000472896 SLCO1C1Q9NYB5 712 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 NDUFAF4Q9P032 175 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 COPZ2Q9P299 210 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 DKK4Q9UBT3 224 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 FAM8A1Q9UBU6 413 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 ARL5AQ9Y689 179 aa9.52□□□□□ -0.88
APTX-216ENST00000472896 MAGEB17A8MXT2 336 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 M0R233 179 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 YKT6O15498 198 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 IRAK2O43187 625 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 PRKYO43930 277 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 OLFM2O95897 454 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 CLEC2LP0C7M8 214 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 NDUFV2P19404 249 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 MMP12P39900 470 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 KIR3DL1P43629 444 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 TTPAP49638 278 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 ALDH6A1Q02252 535 aaKnown RBP9.52□□□□□ -0.89
APTX-216ENST00000472896 CAMK2DQ13557 499 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 GPR176Q14439 515 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 OCLNQ16625 522 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 EXOC3L2Q2M3D2 409 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 TUSC1Q2TAM9 212 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.52□□□□□ -0.89
APTX-216ENST00000472896 NHLRC3Q5JS37 347 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 C22orf42Q6IC83 251 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 FRMPD2BQ6IN97 320 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 RGS7BPQ6MZT1 257 aaPredicted RBP9.52□□□□□ -0.89
APTX-216ENST00000472896 BHLHB9Q6PI77 547 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 QSOX2Q6ZRP7 698 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 HSD17B13Q7Z5P4 300 aaPredicted RBP9.52□□□□□ -0.89
APTX-216ENST00000472896 FGD2Q7Z6J4 655 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 RABEPKQ7Z6M1 372 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 C11orf96Q7Z7L8 435 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 METTL3Q86U44 580 aaKnown RBP9.52□□□□□ -0.89
APTX-216ENST00000472896 LAPTM4BQ86VI4 370 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 LAS2Q8IYD9 372 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 EIF4E3Q8N5X7 224 aaKnown RBP9.52□□□□□ -0.89
APTX-216ENST00000472896 SIDT2Q8NBJ9 832 aaKnown RBP9.52□□□□□ -0.89
APTX-216ENST00000472896 OR13C4Q8NGS5 318 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 EDEM1Q92611 657 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 UBL7Q96S82 380 aaPredicted RBP9.52□□□□□ -0.89
APTX-216ENST00000472896 HBEGFQ99075 208 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 DPAGT1Q9H3H5 408 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 SP110Q9HB58 689 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms