RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 SMARCD2Q92925 531 aa16.3■□□□□ 0.2
LAMP1-203ENST00000472564 B3GNT3Q9Y2A9 372 aa16.3■□□□□ 0.2
LAMP1-203ENST00000472564 AP1M2Q9Y6Q5 423 aa16.3■□□□□ 0.2
LAMP1-203ENST00000472564 OR5K4A6NMS3 321 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 MUSKO15146 869 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 FRS3O43559 492 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 KLF8O95600 359 aaPredicted RBP16.29■□□□□ 0.2
LAMP1-203ENST00000472564 GJA5P36382 358 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 BCL2L15Q5TBC7 163 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 ISL2Q96A47 359 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 SLC6A16Q9GZN6 736 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 ZNF700Q9H0M5 742 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 ANKMY1Q9P2S6 941 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 CLEC4EQ9ULY5 219 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 CSNK1G3Q9Y6M4 447 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 MAP1BP46821 2468 aaKnown RBP16.29■□□□□ 0.2
LAMP1-203ENST00000472564 C9J4A7 227 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 MEN1O00255 615 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 DRD5P21918 477 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 HOXD9P28356 352 aaPredicted RBP16.29■□□□□ 0.2
LAMP1-203ENST00000472564 LRFN4Q6PJG9 635 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 DGLUCYQ7Z3D6 616 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 RHOXF1Q8NHV9 184 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 ADAMTS19Q8TE59 1207 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 SORBS1Q9BX66 1292 aaKnown RBP16.29■□□□□ 0.2
LAMP1-203ENST00000472564 MMP28Q9H239 520 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 ABCD2Q9UBJ2 740 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 DHDHQ9UQ10 334 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 F5H0A9 414 aaPredicted RBP16.29■□□□□ 0.2
LAMP1-203ENST00000472564 AOAHP28039 575 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 C1orf61Q13536 156 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 MPP7Q5T2T1 576 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 FUNDC1Q8IVP5 155 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 RNF175Q8N4F7 328 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 OR51L1Q8NGJ5 315 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 ZNF350Q9GZX5 532 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 VNN3Q9NY84 501 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 CNOT2Q9NZN8 540 aaKnown RBP16.29■□□□□ 0.2
LAMP1-203ENST00000472564 ABI3Q9P2A4 366 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 EPHA6Q9UF33 1036 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 HYKKA2RU49 373 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 VNN2O95498 520 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 HMGN2P05204 90 aaKnown RBP16.29■□□□□ 0.2
LAMP1-203ENST00000472564 NTHL1P78549 312 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 NHSL2Q5HYW2 709 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 CYB561A3Q8NBI2 242 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 TAS2R3Q9NYW6 316 aa16.29■□□□□ 0.2
LAMP1-203ENST00000472564 TEX13CA0A0J9YWL9 993 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 UBFD1O14562 309 aaKnown RBP16.28■□□□□ 0.2
LAMP1-203ENST00000472564 GXYLT1Q4G148 440 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 METTL25Q8N6Q8 603 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 RPL3LQ92901 407 aaKnown RBP16.28■□□□□ 0.2
LAMP1-203ENST00000472564 KCNN1Q92952 543 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 ZNF486Q96H40 463 aaPredicted RBP16.28■□□□□ 0.2
LAMP1-203ENST00000472564 MYNNQ9NPC7 610 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 ZNF41P51814 821 aaPredicted RBP16.28■□□□□ 0.2
LAMP1-203ENST00000472564 SEMA3BQ13214 749 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 OCLNQ16625 522 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 PGBD5Q8N414 524 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 CCDC54Q8NEL0 328 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 OR5D16Q8NGK9 328 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 ISG20Q96AZ6 181 aaKnown RBP16.28■□□□□ 0.2
LAMP1-203ENST00000472564 ZNF559Q9BR84 538 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 FZD3Q9NPG1 666 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 UGT2B10P36537 528 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 ART1P52961 327 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 SHC2P98077 582 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 GRIN2CQ14957 1233 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 SLC22A10Q63ZE4 541 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 UBQLNLQ8IYU4 475 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 MSLNLQ96KJ4 702 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 CPPED1Q9BRF8 314 aaPredicted RBP16.28■□□□□ 0.2
LAMP1-203ENST00000472564 DPH1Q9BZG8 443 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 HMGB3O15347 200 aaKnown RBP16.28■□□□□ 0.2
LAMP1-203ENST00000472564 SCO2O43819 266 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 SLC10A3P09131 477 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 H2BFMP0C1H6 154 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 PVALBP20472 110 aaPredicted RBP16.28■□□□□ 0.2
LAMP1-203ENST00000472564 MC3RP41968 323 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 SLC5A12Q1EHB4 618 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 PYHIN1Q6K0P9 492 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 ANKRD54Q6NXT1 300 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 GPAT4Q86UL3 456 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 ZNF480Q8WV37 535 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 DEDD2Q8WXF8 326 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 ALG8Q9BVK2 526 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 PTGES2Q9H7Z7 377 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 THSD1Q9NS62 852 aa16.28■□□□□ 0.2
LAMP1-203ENST00000472564 H7C2Y5 167 aa16.27■□□□□ 0.2
LAMP1-203ENST00000472564 GKN3PP0CG01 181 aa16.27■□□□□ 0.2
LAMP1-203ENST00000472564 CTSAP10619 480 aa16.27■□□□□ 0.2
LAMP1-203ENST00000472564 HOXC12P31275 282 aa16.27■□□□□ 0.2
LAMP1-203ENST00000472564 SSTR4P31391 388 aa16.27■□□□□ 0.2
LAMP1-203ENST00000472564 NAXEQ8NCW5 288 aa16.27■□□□□ 0.2
LAMP1-203ENST00000472564 OR2T11Q8NH01 316 aa16.27■□□□□ 0.2
LAMP1-203ENST00000472564 OR10A4Q9H209 315 aa16.27■□□□□ 0.2
LAMP1-203ENST00000472564 CRYBG1Q9Y4K1 1723 aa16.27■□□□□ 0.2
LAMP1-203ENST00000472564 CDC40O60508 579 aaKnown RBP eCLIP16.27■□□□□ 0.25e-7■■■■■ 34.4
LAMP1-203ENST00000472564 NUDT7P0C024 238 aa16.27■□□□□ 0.2
LAMP1-203ENST00000472564 NADSYN1Q6IA69 706 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms