RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 MPIP34949 423 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 RCAN2Q14206 197 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 FBXL19-AS1Q494R0 122 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 SPDYAQ5MJ70 313 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 CNPY4Q8N129 248 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 RDH11Q8TC12 318 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 ZPLD1Q8TCW7 415 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 CCDC126Q96EE4 140 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 SLC35A4Q96G79 324 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 VSTM2LQ96N03 204 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 FOLH1BQ9HBA9 442 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 SENP1Q9P0U3 644 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 EMCNQ9ULC0 261 aa20.52■□□□□ 0.88
C9orf3-213ENST00000471978 A0A1W2PPM1 405 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 MBD3L4A6NDZ8 208 aaPredicted RBP20.51■□□□□ 0.87
C9orf3-213ENST00000471978 MBD3L3A6NE82 208 aaPredicted RBP20.51■□□□□ 0.87
C9orf3-213ENST00000471978 MBD3L5A6NJ08 208 aaPredicted RBP20.51■□□□□ 0.87
C9orf3-213ENST00000471978 UBFD1O14562 309 aaKnown RBP20.51■□□□□ 0.87
C9orf3-213ENST00000471978 MYL2P10916 166 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 CYP4B1P13584 511 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 KRT20P35900 424 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 GSTM5P46439 218 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 ART1P52961 327 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 FOXA1P55317 472 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 CEBPEQ15744 281 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 NPSR1Q6W5P4 371 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 PLCZ1Q86YW0 608 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 FAM9CQ8IZT9 166 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 MBD3L2Q8NHZ7 208 aaPredicted RBP20.51■□□□□ 0.87
C9orf3-213ENST00000471978 CDC26Q8NHZ8 85 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 BBS4Q96RK4 519 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 POLDIP3Q9BY77 421 aaKnown RBP20.51■□□□□ 0.87
C9orf3-213ENST00000471978 OR2B2Q9GZK3 357 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 SIRT5Q9NXA8 310 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 FOXD3Q9UJU5 478 aaPredicted RBP20.51■□□□□ 0.87
C9orf3-213ENST00000471978 ITPR3Q14573 2671 aa20.51■□□□□ 0.87
C9orf3-213ENST00000471978 KIAA1549Q9HCM3 1950 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 G3V2L1 256 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 PLOD3O60568 738 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 TSPAN2O60636 221 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 GLRA3O75311 464 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 CPN1P15169 458 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 CD1EP15812 388 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 CTSSP25774 331 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 IL12BP29460 328 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 AGFG1P52594 562 aaKnown RBP20.5■□□□□ 0.87
C9orf3-213ENST00000471978 PSPHP78330 225 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 ZNF763Q0D2J5 394 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 C2orf80Q0P641 193 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 EFR3AQ14156 821 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 IMPG1Q17R60 797 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 FLYWCH1Q4VC44 716 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 ENPP6Q6UWR7 440 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 ZYG11AQ6WRX3 759 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 LARP4Q71RC2 724 aaKnown RBP eCLIP20.5■□□□□ 0.87
C9orf3-213ENST00000471978 SLC44A2Q8IWA5 706 aaPredicted RBP20.5■□□□□ 0.87
C9orf3-213ENST00000471978 TRIM42Q8IWZ5 723 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 GSPT2Q8IYD1 628 aaKnown RBP20.5■□□□□ 0.87
C9orf3-213ENST00000471978 OR7G2Q8NG99 324 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 GPATCH1Q9BRR8 931 aaKnown RBP20.5■□□□□ 0.87
C9orf3-213ENST00000471978 SHCBP1LQ9BZQ2 653 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 TAS2R10Q9NYW0 307 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 TAS2R9Q9NYW1 312 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 WIF1Q9Y5W5 379 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 MTORP42345 2549 aa20.5■□□□□ 0.87
C9orf3-213ENST00000471978 MED12Q93074 2177 aa20.49■□□□□ 0.87
C9orf3-213ENST00000471978 H0Y3Z8 333 aa20.49■□□□□ 0.87
C9orf3-213ENST00000471978 DDCP20711 480 aa20.49■□□□□ 0.87
C9orf3-213ENST00000471978 OPRM1P35372 400 aa20.49■□□□□ 0.87
C9orf3-213ENST00000471978 SRYQ05066 204 aa20.49■□□□□ 0.87
C9orf3-213ENST00000471978 IFNEQ86WN2 208 aa20.49■□□□□ 0.87
C9orf3-213ENST00000471978 C9orf106Q8NAJ2 232 aa20.49■□□□□ 0.87
C9orf3-213ENST00000471978 FAM222BQ8WU58 562 aa20.49■□□□□ 0.87
C9orf3-213ENST00000471978 TUBA1CQ9BQE3 449 aa20.49■□□□□ 0.87
C9orf3-213ENST00000471978 STMN4Q9H169 189 aaPredicted RBP20.49■□□□□ 0.87
C9orf3-213ENST00000471978 CLEC4MQ9H2X3 399 aaPredicted RBP20.49■□□□□ 0.87
C9orf3-213ENST00000471978 FBXL2Q9UKC9 423 aa20.49■□□□□ 0.87
C9orf3-213ENST00000471978 OR10H1Q9Y4A9 318 aa20.49■□□□□ 0.87
C9orf3-213ENST00000471978 C2CD3Q4AC94 2353 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 MED13LQ71F56 2210 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 MYO1GB0I1T2 1018 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 CRCPO75575 148 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 SRD5A2P31213 254 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 SLCO1A2P46721 670 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 DGKQP52824 942 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 IST1P53990 364 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 PNLIPRP2P54317 469 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 RIPPLY3P57055 190 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 PRSS53Q2L4Q9 553 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 OR5M10Q6IEU7 315 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 OR4N2Q8NGD1 307 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 EFHD2Q96C19 240 aaPredicted RBP20.48■□□□□ 0.87
C9orf3-213ENST00000471978 DTNBP1Q96EV8 351 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 RASSF1Q9NS23 344 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 NF1P21359 2839 aa20.48■□□□□ 0.87
C9orf3-213ENST00000471978 AKAP6Q13023 2319 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 FAM221AA4D161 298 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 A6NNC1 897 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 EEF1E1-BLOC1S5C9J1V9 151 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 EEF1E1O43324 174 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms