RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 CLDN18P56856 261 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 C2orf80Q0P641 193 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 PLCXD2Q0VAA5 305 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 GAB1Q13480 694 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 POU4F3Q15319 338 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 SLC25A35Q3KQZ1 300 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 NHSL2Q5HYW2 709 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 NSUN5P2Q63ZY6 315 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 CLEC6AQ6EIG7 209 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 PAGE2Q7Z2X7 111 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 ZAR1Q86SH2 424 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 ADGRE4PQ86SQ3 457 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 EXOC3L1Q86VI1 746 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 SLC44A2Q8IWA5 706 aaPredicted RBP7.33□□□□□ -1.24
USP48-207ENST00000471752 MYRIPQ8NFW9 859 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 OR1J4Q8NGS1 313 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 CDC26Q8NHZ8 85 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 GFM2Q969S9 779 aaKnown RBP7.33□□□□□ -1.24
USP48-207ENST00000471752 INTS12Q96CB8 462 aaKnown RBP7.33□□□□□ -1.24
USP48-207ENST00000471752 ZNF382Q96SR6 550 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 TMUB1Q9BVT8 246 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 POLDIP3Q9BY77 421 aaKnown RBP7.33□□□□□ -1.24
USP48-207ENST00000471752 METTL7AQ9H8H3 244 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 BRF2Q9HAW0 419 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 FOLH1BQ9HBA9 442 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 MID1IP1Q9NPA3 183 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 PFDN4Q9NQP4 134 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 RASSF1Q9NS23 344 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 FBXO34Q9NWN3 711 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 JKAMPQ9P055 326 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 MED11Q9P086 117 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 GIMAP2Q9UG22 337 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 MCM8Q9UJA3 840 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 SNX6Q9UNH7 406 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 CCL27Q9Y4X3 112 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 POLR3HQ9Y535 204 aaPredicted RBP7.33□□□□□ -1.24
USP48-207ENST00000471752 IKBKGQ9Y6K9 419 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 ABCA2Q9BZC7 2435 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 PCNX3Q9H6A9 2034 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 PRR14LQ5THK1 2151 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 CSPG4Q6UVK1 2322 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 GNG14A0A1W2PPG7 69 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 MBD3L4A6NDZ8 208 aaPredicted RBP7.32□□□□□ -1.24
USP48-207ENST00000471752 MBD3L3A6NE82 208 aaPredicted RBP7.32□□□□□ -1.24
USP48-207ENST00000471752 PRAMEF25A6NGN4 478 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 MBD3L5A6NJ08 208 aaPredicted RBP7.32□□□□□ -1.24
USP48-207ENST00000471752 A6NNC1 897 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 CLCA1A8K7I4 914 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 HSPB2A8KAH6 182 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 TMEM233B4DJY2 109 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 TO15178 435 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 GMFGO60234 142 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 FADS1O60427 444 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 OPN1LWP04000 364 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 PROCP04070 461 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 ABHD2P08910 425 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 ANXA4P09525 319 aaPredicted RBP7.32□□□□□ -1.24
USP48-207ENST00000471752 GABRA1P14867 456 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 NAGAP17050 411 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 TIA1P31483 386 aaKnown RBP eCLIP7.32□□□□□ -1.24
USP48-207ENST00000471752 ARRB2P32121 409 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 TIMP3P35625 211 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 MC3RP41968 323 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 NRG3P56975 720 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 PSG6Q00889 435 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 RASA2Q15283 850 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 CEBPEQ15744 281 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 HSPB2Q16082 182 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 ZNF385BQ569K4 471 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 CES4AQ5XG92 561 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 FAM71E1Q6IPT2 247 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 SLC30A6Q6NXT4 461 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 TMEM107Q6UX40 140 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 LARP4Q71RC2 724 aaKnown RBP eCLIP7.32□□□□□ -1.24
USP48-207ENST00000471752 ZNF551Q7Z340 670 aaPredicted RBP7.32□□□□□ -1.24
USP48-207ENST00000471752 LUZP2Q86TE4 346 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 MARCH3Q86UD3 253 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 PLCZ1Q86YW0 608 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 DND1Q8IYX4 353 aaKnown RBP7.32□□□□□ -1.24
USP48-207ENST00000471752 CLYBLQ8N0X4 340 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 C17orf47Q8NEP4 570 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 OR2T11Q8NH01 316 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 OR2W6PQ8NHA6 318 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 OR14L1PQ8NHC6 308 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 MBD3L2Q8NHZ7 208 aaPredicted RBP7.32□□□□□ -1.24
USP48-207ENST00000471752 RNF138Q8WVD3 245 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 FIG4Q92562 907 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 RNASE6Q93091 150 aaKnown RBP7.32□□□□□ -1.24
USP48-207ENST00000471752 ZNF524Q96C55 264 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 L3HYPDHQ96EM0 354 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 HSPBAP1Q96EW2 488 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 OTUB1Q96FW1 271 aaPredicted RBP7.32□□□□□ -1.24
USP48-207ENST00000471752 COL21A1Q96P44 957 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 BTBD9Q96Q07 612 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 SECISBP2Q96T21 854 aaKnown RBP7.32□□□□□ -1.24
USP48-207ENST00000471752 SMR3AQ99954 134 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 PIGQQ9BRB3 760 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 OSBPL11Q9BXB4 747 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 OR2B2Q9GZK3 357 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 CLEC4MQ9H2X3 399 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms