RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PIGBOS1A0A0B4J2F0 54 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 IL3P08700 152 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ELK4P28324 431 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PTGR1Q14914 329 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PAPD4Q6PIY7 484 aaKnown RBP12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 GPR149Q86SP6 731 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 C14orf80Q86SX3 495 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 RPLP0P6Q8NHW5 317 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CHPT1Q8WUD6 406 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 NANOS1Q8WY41 292 aaKnown RBP12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZNF775Q96BV0 537 aaPredicted RBP12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZNF559Q9BR84 538 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TMEM175Q9BSA9 504 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 HDHD5Q9BXW7 423 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZNF286AQ9HBT8 521 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 KLHL9Q9P2J3 617 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MKLN1Q9UL63 735 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 OR8U9P0C7N5 309 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 RFC2P35250 354 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 GCGRP47871 477 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SLC35G1Q2M3R5 365 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 OR4K13Q8NH42 304 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 DNAJB8Q8NHS0 232 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PPP1R35Q8TAP8 253 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SAMD10Q9BYL1 202 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 GPR160Q9UJ42 338 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 AP1G1O43747 822 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 NUDT21O43809 227 aaKnown RBP12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CRTAPO75718 401 aaPredicted RBP12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SOD2P04179 222 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TIMP2P16035 220 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ASRGL1Q7L266 308 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PIGWQ7Z7B1 504 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 C16orf78Q8WTQ4 265 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LPAR4Q99677 370 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 OR14J1Q9UGF5 321 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ACSL6Q9UKU0 697 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ADRB3P13945 408 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 IL32P24001 234 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PTH2RP49190 550 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PRKXP51817 358 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PGGT1BP53609 377 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PIGFQ07326 219 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MOCOSQ96EN8 888 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PKP2Q99959 881 aa12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TP63Q9H3D4 680 aaPredicted RBP12.61□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CAPN3P20807 821 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FCER1GP30273 86 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LGALS4P56470 323 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 HNF4GQ14541 408 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 NKPD1Q17RQ9 610 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SLC27A4Q6P1M0 643 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ARL14Q8N4G2 192 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LINC00471Q8N535 108 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZC3HAV1LQ96H79 300 aaKnown RBP12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SAMD11Q96NU1 681 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FOXN4Q96NZ1 517 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SMOC2Q9H3U7 446 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 NGBQ9NPG2 151 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ERVK13-1Q9NX77 482 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZIM2Q9NZV7 527 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 GPR52Q9Y2T5 361 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SERTM1A2A2V5 107 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 DLGAP1O14490 977 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PGCP20142 388 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 UQCRC2P22695 453 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CAV2P51636 162 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SIM1P81133 766 aaPredicted RBP12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 KIAA1614Q5VZ46 1190 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZSWIM9Q86XI8 627 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 BANPQ8N9N5 519 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 OR52P1PQ8NH57 321 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 DDIT4LQ96D03 193 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 NDUFV2P19404 249 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ANXA7P20073 488 aaKnown RBP12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CDKN3Q16667 212 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 BPHLQ86WA6 291 aaPredicted RBP12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MCATQ8IVS2 390 aaKnown RBP12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 BEST3Q8N1M1 668 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FAM3CQ92520 227 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ATOH1Q92858 354 aaPredicted RBP12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ARNT2Q9HBZ2 717 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 M0R233 179 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TAS2R43P59537 309 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CTXN1P60606 82 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FAM120CQ9NX05 1096 aaKnown RBP12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MGAT4BQ9UQ53 548 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 RHBDD3Q9Y3P4 386 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 POLR1CO15160 346 aaPredicted RBP12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 NR4A2P43354 598 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 HK3P52790 923 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 GNB2P62879 340 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 C11orf91Q3C1V1 193 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SLC36A3Q495N2 470 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MFSD5Q6N075 450 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CREB3L1Q96BA8 519 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZNF681Q96N22 645 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 OR14A2Q96R54 314 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TP53BP1Q12888 1972 aaPredicted RBP12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 F5P12259 2224 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms