RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 B3GNTL1Q67FW5 361 aaPredicted RBP9.13□□□□□ -0.95
SF3A1-207ENST00000471342 TCTN3Q6NUS6 607 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 ZCCHC12Q6PEW1 402 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 FRRS1Q6ZNA5 592 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 CCDC80Q76M96 950 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 TSPYL5Q86VY4 417 aaPredicted RBP9.13□□□□□ -0.95
SF3A1-207ENST00000471342 PROSER1Q86XN7 944 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 IL22RA1Q8N6P7 574 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 KDF1Q8NAX2 398 aaPredicted RBP9.13□□□□□ -0.95
SF3A1-207ENST00000471342 PCYOX1LQ8NBM8 494 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 VPS37AQ8NEZ2 397 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 GPR32P1Q8NGA4 272 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 ZFP28Q8NHY6 868 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 CDS1Q92903 461 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 MS4A4EQ96PG1 132 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 STACQ99469 402 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 LPAR4Q99677 370 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 CNPPD1Q9BV87 410 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 DPH1Q9BZG8 443 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 ZNF350Q9GZX5 532 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 PIF1Q9H611 641 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 TRIM45Q9H8W5 580 aaPredicted RBP9.13□□□□□ -0.95
SF3A1-207ENST00000471342 BCL2L10Q9HD36 194 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 DDX18Q9NVP1 670 aaKnown RBP9.13□□□□□ -0.95
SF3A1-207ENST00000471342 GID8Q9NWU2 228 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 MYOTQ9UBF9 498 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 ANGPTL2Q9UKU9 493 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 RAXQ9Y2V3 346 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 SNX8Q9Y5X2 465 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 KCNMB2Q9Y691 235 aa9.13□□□□□ -0.95
SF3A1-207ENST00000471342 CHD8Q9HCK8 2581 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 CDC14CA4D256 554 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 SYNDIG1LA6NDD5 238 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 FRG2CA6NGY1 282 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 OR6C76A6NM76 312 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 K7EM74 188 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 K7ENP7 123 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 TPST2O60704 377 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 DNAJC8O75937 253 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-207ENST00000471342 ATP5HO75947 161 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 PGM3O95394 542 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 PDGFAP04085 211 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 SEMG1P04279 462 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 SERPINA7P05543 415 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 GGT1P19440 569 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 CD247P20963 164 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 ATP6V1B2P21281 511 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 TRHRP34981 398 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-207ENST00000471342 PIGAP37287 484 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 CHRNEQ04844 493 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 CDC20Q12834 499 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 TP53BP2Q13625 1128 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 VMACQ2NL98 169 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 ARHGAP11BQ3KRB8 267 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 RPS26P11Q5JNZ5 115 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-207ENST00000471342 CCNJQ5T5M9 372 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 FCRLBQ6BAA4 426 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 TYW3Q6IPR3 259 aaKnown RBP9.12□□□□□ -0.95
SF3A1-207ENST00000471342 INO80CQ6PI98 192 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-207ENST00000471342 IGFL2Q6UWQ7 119 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 RNF111Q6ZNA4 994 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 GALNT10Q86SR1 603 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 ULK2Q8IYT8 1036 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 FAM86B1Q8N7N1 296 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 BCORP1Q8N888 145 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 CDRT4Q8N9R6 151 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 ZNF248Q8NDW4 579 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 C7orf57Q8NEG2 295 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 OR4D11Q8NGI4 311 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 OR4C3Q8NH37 302 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 TP53INP1Q96A56 240 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 SLCO4A1Q96BD0 722 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 MOAP1Q96BY2 351 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 VMP1Q96GC9 406 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 CRELD1Q96HD1 420 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 REXO5Q96IC2 774 aaKnown RBP9.12□□□□□ -0.95
SF3A1-207ENST00000471342 CCNL2Q96S94 520 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-207ENST00000471342 THTPAQ9BU02 230 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 ALG2Q9H553 416 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 CCDC86Q9H6F5 360 aaKnown RBP9.12□□□□□ -0.95
SF3A1-207ENST00000471342 ZNF552Q9H707 407 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-207ENST00000471342 PRM3Q9NNZ6 103 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 SPAG4Q9NPE6 437 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 EQTNQ9NQ60 294 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 GIMAP4Q9NUV9 329 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 PRPF19Q9UMS4 504 aaKnown RBP9.12□□□□□ -0.95
SF3A1-207ENST00000471342 PADI2Q9Y2J8 665 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 CLCA3PQ9Y6N3 262 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 CROCCQ5TZA2 2017 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 CACNA1GO43497 2377 aa9.12□□□□□ -0.95
SF3A1-207ENST00000471342 TRBV11-1A0A0K0K1C0 115 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 KLK10O43240 276 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 OIP5O43482 229 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 FADS1O60427 444 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 TPST1O60507 370 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 PRAMEF2O60811 474 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 BCAS2O75934 225 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-207ENST00000471342 MFN2O95140 757 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 NCK1P16333 377 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 TNNI3P19429 210 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms