RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 OR1D2P34982 312 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 CTNNB1P35222 781 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 TUFMP49411 452 aaKnown RBP4.45□□□□□ -1.7
CCDC39-202ENST00000471307 RPL10AP62906 217 aaKnown RBP4.45□□□□□ -1.7
CCDC39-202ENST00000471307 PEX6Q13608 980 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 VEZF1Q14119 521 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 PTPRCAPQ14761 206 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 PSMD5Q16401 504 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 GOLGA7BQ2TAP0 167 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 HIGD2BQ4VC39 106 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 SLC39A12Q504Y0 691 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 PMF1Q6P1K2 205 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 FCRLAQ7L513 359 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 CARNMT1Q8N4J0 409 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 NOA1Q8NC60 698 aaKnown RBP4.45□□□□□ -1.7
CCDC39-202ENST00000471307 OR10T2Q8NGX3 314 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 ZNF461Q8TAF7 563 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 UBA3Q8TBC4 463 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 SMARCD1Q96GM5 515 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 PCED1BQ96HM7 432 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 PRRG4Q9BZD6 226 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 LZTFL1Q9NQ48 299 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 PARVAQ9NVD7 372 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 COMMD8Q9NX08 183 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 UVRAGQ9P2Y5 699 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 CYTH4Q9UIA0 394 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 GUCA1BQ9UMX6 200 aa4.45□□□□□ -1.7
CCDC39-202ENST00000471307 PTPRDP23468 1912 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 ZNF318Q5VUA4 2279 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 TSC2P49815 1807 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 NLRC5Q86WI3 1866 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 A0A1W2PPM1 405 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 MACROD2A1Z1Q3 448 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 SIGLEC16A6NMB1 481 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 USP27XA6NNY8 438 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 CLDN5O00501 218 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 CA3P07451 260 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 KRT3P12035 628 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 MYOGP15173 224 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 ERCC2P18074 760 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 HLA-DPA1P20036 260 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 CYP2F1P24903 491 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 SLC1A1P43005 524 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 OR3A2P47893 321 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 ARPP19P56211 112 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 MAP3K7CLP57077 242 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 SCN1BQ07699 218 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 NPTX1Q15818 432 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 C2orf76Q3KRA6 126 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 PTPN20Q4JDL3 420 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 CST9LP1Q5W188 147 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 PM20D1Q6GTS8 502 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 DCUN1D2Q6PH85 259 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 PRSS55Q6UWB4 352 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-202ENST00000471307 GDPGP1Q6ZNW5 385 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 CLEC20AQ6ZU45 233 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 CHMP1BQ7LBR1 199 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 ARCQ7LC44 396 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 TDHQ8IZJ6 230 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 SYCE1Q8N0S2 351 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 RYBPQ8N488 228 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-202ENST00000471307 MRPL43Q8N983 215 aaKnown RBP4.44□□□□□ -1.7
CCDC39-202ENST00000471307 KIF18AQ8NI77 898 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 MYLPFQ96A32 169 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 B3GALT6Q96L58 329 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 ALS2CR12Q96Q35 445 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 CPXM1Q96SM3 734 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 KCNK16Q96T55 309 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 C11orf70Q9BRQ4 267 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 TRIM62Q9BVG3 475 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 CCDC106Q9BWC9 280 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 ZBP1Q9H171 429 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 FBXO44Q9H4M3 255 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 CDH20Q9HBT6 801 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 DMAP1Q9NPF5 467 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-202ENST00000471307 IL37Q9NZH6 218 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 CTSZQ9UBR2 303 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 ANAPC2Q9UJX6 822 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 ELF5Q9UKW6 265 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-202ENST00000471307 TFR2Q9UP52 801 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 KIAA1671Q9BY89 1806 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 TNRC18O15417 2968 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-202ENST00000471307 MYO7AQ13402 2215 aa4.44□□□□□ -1.7
CCDC39-202ENST00000471307 MTCL1Q9Y4B5 1905 aaKnown RBP4.43□□□□□ -1.7
CCDC39-202ENST00000471307 CHD9Q3L8U1 2897 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 TRBC2A0A5B9 178 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 FAM92AA1XBS5 289 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 MTMR11A4FU01 709 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 ACOD1A6NK06 481 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 F8VP50 259 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 FPGTO14772 594 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 ADAM12O43184 909 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 BUB1O43683 1085 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 PALMO75781 387 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 ATP1B1P05026 303 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 OR4Q2P0C623 313 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 EPCAMP16422 314 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 DESP17661 470 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 ITIH1P19827 911 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 CPT2P23786 658 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms