RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 IL22RA2Q969J5 263 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 MARC2Q969Z3 335 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 ACCSQ96QU6 501 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 TBX15Q96SF7 602 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 CNPY3Q9BT09 278 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 CCSER1Q9C0I3 900 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 ALG9Q9H6U8 611 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 MAGEF1Q9HAY2 307 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 EXOSC3Q9NQT5 275 aaKnown RBP0.87□□□□□ -2.27
UBXN4-207ENST00000471246 PURGQ9UJV8 347 aaKnown RBP0.87□□□□□ -2.27
UBXN4-207ENST00000471246 MTCL1Q9Y4B5 1905 aaKnown RBP0.87□□□□□ -2.27
UBXN4-207ENST00000471246 SYNJ2O15056 1496 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 IGLV3-16A0A075B6K0 115 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 A0A0J9YVX5 310 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 TRBV7-9A0A0J9YWB2 115 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 LRIT2A6NDA9 550 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 PDLIM1O00151 329 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 CACNB4O00305 520 aaPredicted RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 OR7A17O14581 309 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 HTATSF1O43719 755 aaKnown RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 SDC3O75056 442 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF254O75437 659 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 MMP23AO75900 390 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 ECDO95905 644 aaPredicted RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 CCNE1P24864 410 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 NF2P35240 595 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 NPY2RP49146 381 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 LINC00315P59091 139 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF45Q02386 682 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 YWHAHQ04917 246 aaPredicted RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 BCL2L1Q07817 233 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 NPRL3Q12980 569 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 BNIP1Q12981 228 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 SCARB2Q14108 478 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 DPYSQ14117 519 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 EIF2B1Q14232 305 aaKnown RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 ZKSCAN8Q15776 578 aaPredicted RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 FUT11Q495W5 492 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 PRR5LQ6MZQ0 368 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 CWC27Q6UX04 472 aaKnown RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 B3GLCTQ6Y288 498 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 LINC00696Q6ZRV3 163 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 FRA10AC1Q70Z53 315 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 PRSS42Q7Z5A4 293 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 HSD17B13Q7Z5P4 300 aaPredicted RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 PARGQ86W56 976 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 NAT8LQ8N9F0 302 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 RNASE8Q8TDE3 154 aaKnown RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 ADAMTS16Q8TE57 1224 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 P3H4Q92791 437 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 STARD4Q96DR4 205 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 DNAJA3Q96EY1 480 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 CFAP36Q96G28 342 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 GPR137Q96N19 417 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 IL4I1Q96RQ9 567 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 CTRCQ99895 268 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 NLNQ9BYT8 704 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 OSBPL8Q9BZF1 889 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 GLT8D2Q9H1C3 349 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 OR51J1Q9H342 316 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 PTGES2Q9H7Z7 377 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 AKIRIN1Q9H9L7 192 aaPredicted RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 NANOGQ9H9S0 305 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 PATZ1Q9HBE1 687 aaKnown RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 ZCCHC17Q9NP64 241 aaKnown RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 MEPEQ9NQ76 525 aaPredicted RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 STARD5Q9NSY2 213 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 ZCCHC3Q9NUD5 404 aaKnown RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 TERF2IPQ9NYB0 399 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 AKAP7Q9P0M2 348 aaPredicted RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 VPS54Q9P1Q0 977 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 ERVK-18Q9QC07 812 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 LHX3Q9UBR4 397 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 RAB26Q9ULW5 256 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 BARX2Q9UMQ3 279 aaPredicted RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 ENTPD4Q9Y227 616 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 LIPT1Q9Y234 373 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 KLHDC2Q9Y2U9 406 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 MRPS2Q9Y399 296 aaKnown RBP0.86□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF175Q9Y473 711 aa0.86□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF320A2RRD8 509 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 SMIM30A4D0T7 59 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 C5orf51A6NDU8 294 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 H0Y626 953 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 ARPC1BO15143 372 aaKnown RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 LRP3O75074 770 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 ATP6V1G1O75348 118 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 LYPLA1O75608 230 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 IGSF6O95976 241 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 HPNP05981 417 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 GSTA1P08263 222 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 VDRP11473 427 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 CYP11B1P15538 503 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 FERP16591 822 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 RFC2P35250 354 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 STK19P49842 368 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 SGSHP51688 502 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 RAG2P55895 527 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 NLRP11P59045 1033 aaKnown RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 STX1BP61266 288 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms