RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 CDC42EP3Q9UKI2 254 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 PLLPQ9Y342 182 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 GOLGA6L10A6NI86 522 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 OR6C70A6NIJ9 312 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 UBXN8O00124 270 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 CLOCKO15516 846 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 ADAM11O75078 769 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 TNFRSF21O75509 655 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 ERAL1O75616 437 aaKnown RBP17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 WISP3O95389 354 aaPredicted RBP17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 PLGP00747 810 aaPredicted RBP17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 FEN1P39748 380 aaKnown RBP17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 SUCLG1P53597 346 aaKnown RBP17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 DSCR4P56555 118 aaPredicted RBP17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 MORF4L2Q15014 288 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 SGCBQ16585 318 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 LIPJQ5W064 366 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 FAM214BQ7L5A3 538 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 FBXO36Q8NEA4 188 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 OR52R1Q8NGF1 315 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 TACO1Q9BSH4 297 aaKnown RBP17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 PRODH2Q9UF12 536 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 LIPT1Q9Y234 373 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 EMC9Q9Y3B6 208 aa17.05■□□□□ 0.32
NCKIPSD-209ENST00000470006 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.05■□□□□ 0.327e-12■□□□□ 9.8
NCKIPSD-209ENST00000470006 PRR14LQ5THK1 2151 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 H3BML4 177 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 KLK1P06870 262 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 HK1P19367 917 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 DRD5P21918 477 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 IL12BP29460 328 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 ARL1P40616 181 aaPredicted RBP17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 PPICP45877 212 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 CTBP2P56545 445 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 B3GALT5-AS1P59052 145 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 RPS3AP61247 264 aaKnown RBP17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 FAPQ12884 760 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 ILF2Q12905 390 aaKnown RBP17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 PRICKLE4Q2TBC4 344 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 GBP7Q8N8V2 638 aaPredicted RBP17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 RAB3IL1Q8TBN0 382 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 FBXW5Q969U6 566 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 HS6ST2Q96MM7 605 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 KCNK17Q96T54 332 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 NTMT1Q9BV86 223 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 C19orf24Q9BVV8 132 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 ACTR6Q9GZN1 396 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 MOCS1Q9NZB8 636 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 MAT2BQ9NZL9 334 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 PPP4R1LQ9P1A2 415 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 ZNF337Q9Y3M9 751 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 ZNF175Q9Y473 711 aa17.04■□□□□ 0.32
NCKIPSD-209ENST00000470006 SOD3P08294 240 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 MAP4K2Q12851 820 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 PDIA2Q13087 525 aaKnown RBP17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 EFR3AQ14156 821 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 CCNYL2Q5T2Q4 361 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 STAC2Q6ZMT1 411 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 ZNF662Q6ZS27 426 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 RAPH1Q70E73 1250 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 OR5M1Q8NGP8 315 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 SMAP2Q8WU79 429 aaPredicted RBP17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 GFM2Q969S9 779 aaKnown RBP17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 TMEM204Q9BSN7 226 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 DDX47Q9H0S4 455 aaKnown RBP17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 DSN1Q9H410 356 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 SMYD2Q9NRG4 433 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 CLEC4AQ9UMR7 237 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 TSC22D4Q9Y3Q8 395 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 RNF115Q9Y4L5 304 aa17.03■□□□□ 0.32
NCKIPSD-209ENST00000470006 A0A1W2PP18 115 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 H0YIV9 168 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 OVOL3O00110 214 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 SCO2O43819 266 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 GPRIN2O60269 458 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 FCGR2AP12318 317 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 CSNK2A2P19784 350 aaPredicted RBP17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 PIK3CGP48736 1102 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 CLDN15P56746 228 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 RAB10P61026 200 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 MGAT2Q10469 447 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 TRMT12Q53H54 448 aaKnown RBP17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 LARP4Q71RC2 724 aaKnown RBP eCLIP17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 UBTD2Q8WUN7 234 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 SERPINI1Q99574 410 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 RHNO1Q9BSD3 238 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 JRKLQ9Y4A0 524 aa17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 MAGED1Q9Y5V3 778 aaPredicted RBP17.02■□□□□ 0.32
NCKIPSD-209ENST00000470006 ANK2Q01484 3957 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 C17orf51A8MQB3 221 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 TO15178 435 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 CBX7O95931 251 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 IGHV4-39P01824 125 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 CD3EP07766 207 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 CLDN20P56880 219 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 GPX6P59796 221 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 FASTKD3Q14CZ7 662 aaKnown RBP17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 C6orf52Q5T4I8 152 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 PAGE2Q7Z2X7 111 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 STK32CQ86UX6 486 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms