RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 JKAMPQ9P055 326 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 FBXL2Q9UKC9 423 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 EDARQ9UNE0 448 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 H0Y3Z8 333 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 ZIC3O60481 467 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 TSPAN2O60636 221 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 ERN1O75460 977 aaKnown RBP12.06□□□□□ -0.48
CPSF4-210ENST00000469897 RCBTB2O95199 551 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 IL18BPO95998 194 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 ANXA4P09525 319 aaPredicted RBP12.06□□□□□ -0.48
CPSF4-210ENST00000469897 TCEA1P23193 301 aaKnown RBP12.06□□□□□ -0.48
CPSF4-210ENST00000469897 MPIP34949 423 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 KRT20P35900 424 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 PRKAA2P54646 552 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 GFRA1P56159 465 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 ACSM2AQ08AH3 577 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 PRSS53Q2L4Q9 553 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 SPDYAQ5MJ70 313 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 ACSM2BQ68CK6 577 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 NPSR1Q6W5P4 371 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 LARP4Q71RC2 724 aaKnown RBP eCLIP12.06□□□□□ -0.48
CPSF4-210ENST00000469897 LUZP2Q86TE4 346 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 TGIF2LYQ8IUE0 185 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 SLC44A2Q8IWA5 706 aaPredicted RBP12.06□□□□□ -0.48
CPSF4-210ENST00000469897 CHDHQ8NE62 594 aaPredicted RBP12.06□□□□□ -0.48
CPSF4-210ENST00000469897 ZNF675Q8TD23 568 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 SLC35A4Q96G79 324 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 VSTM2LQ96N03 204 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 G6PC3Q9BUM1 346 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 RBM24Q9BX46 236 aaKnown RBP12.06□□□□□ -0.48
CPSF4-210ENST00000469897 OR2B2Q9GZK3 357 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 RPH3AQ9Y2J0 694 aaPredicted RBP12.06□□□□□ -0.48
CPSF4-210ENST00000469897 ZNF407Q9C0G0 2248 aa12.06□□□□□ -0.48
CPSF4-210ENST00000469897 ANKRD17O75179 2603 aaKnown RBP12.06□□□□□ -0.48
CPSF4-210ENST00000469897 CELSR1Q9NYQ6 3014 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 F8P00451 2351 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 CLCA1A8K7I4 914 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 C17orf51A8MQB3 221 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 UBFD1O14562 309 aaKnown RBP12.05□□□□□ -0.48
CPSF4-210ENST00000469897 ABCB7O75027 752 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 PYGBP11216 843 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 KLK2P20151 261 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 IL12BP29460 328 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 TIA1P31483 386 aaKnown RBP eCLIP12.05□□□□□ -0.48
CPSF4-210ENST00000469897 PNLIPRP2P54317 469 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 FOXA1P55317 472 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 C2orf80Q0P641 193 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 SLC29A2Q14542 456 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 ERCC6LQ2NKX8 1250 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 SPIN4Q56A73 249 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 AAGABQ6PD74 315 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 TRMT10CQ7L0Y3 403 aaKnown RBP12.05□□□□□ -0.48
CPSF4-210ENST00000469897 ADGRE4PQ86SQ3 457 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 IFNEQ86WN2 208 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 SLC22A9Q8IVM8 553 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 SAMD14Q8IZD0 417 aaPredicted RBP12.05□□□□□ -0.48
CPSF4-210ENST00000469897 GCNT2Q8N0V5 402 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 CCNYL1Q8N7R7 359 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 OR7G2Q8NG99 324 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 WNT2BQ93097 391 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 EFHD2Q96C19 240 aaPredicted RBP12.05□□□□□ -0.48
CPSF4-210ENST00000469897 C11orf24Q96F05 449 aaPredicted RBP12.05□□□□□ -0.48
CPSF4-210ENST00000469897 SFXN2Q96NB2 322 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 BTBD9Q96Q07 612 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 BBS4Q96RK4 519 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 TM9SF2Q99805 663 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 FOLH1BQ9HBA9 442 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 MID1IP1Q9NPA3 183 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 GIMAP4Q9NUV9 329 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 TAS2R9Q9NYW1 312 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 TBK1Q9UHD2 729 aa12.05□□□□□ -0.48
CPSF4-210ENST00000469897 HCFC1P51610 2035 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 A0A1W2PPM1 405 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 B4DXG7 233 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 PLOD2O00469 737 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 RIPK2O43353 540 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 PLOD3O60568 738 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 JUNP05412 331 aaKnown RBP12.04□□□□□ -0.48
CPSF4-210ENST00000469897 ABHD2P08910 425 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 FAM153BP0C7A2 387 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 DPP4P27487 766 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 SRD5A2P31213 254 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 LHX2P50458 406 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 GAS1P54826 345 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 PKNOX1P55347 436 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 PPP2R2AP63151 447 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 LCP2Q13094 533 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 EFR3AQ14156 821 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 FAM153CQ494X1 144 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 SH2D4BQ5SQS7 431 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 GALNT18Q6P9A2 607 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 LCA5Q86VQ0 697 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 FAM9CQ8IZT9 166 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 CDC26Q8NHZ8 85 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 ERP27Q96DN0 273 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 L3HYPDHQ96EM0 354 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 UCN2Q96RP3 112 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 YIPF4Q9BSR8 244 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 SFXN3Q9BWM7 321 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 DSN1Q9H410 356 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms