RNA–Protein interactions for RNA: ENST00000469003.5

CCDC28B-204, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 2

Gene CCDC28B, Length 1,235 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-204ENST00000469003 CEBPEQ15744 281 aa15.09■□□□□ 0.01
CCDC28B-204ENST00000469003 ERCC6LQ2NKX8 1250 aa15.09■□□□□ 0.01
CCDC28B-204ENST00000469003 CT45A2Q5DJT8 189 aa15.09■□□□□ 0.01
CCDC28B-204ENST00000469003 WDSUB1Q8N9V3 476 aa15.09■□□□□ 0.01
CCDC28B-204ENST00000469003 MZB1Q8WU39 189 aa15.09■□□□□ 0.01
CCDC28B-204ENST00000469003 KCNA7Q96RP8 456 aa15.09■□□□□ 0.01
CCDC28B-204ENST00000469003 GSTO2Q9H4Y5 243 aa15.09■□□□□ 0.01
CCDC28B-204ENST00000469003 ANKRA2Q9H9E1 313 aa15.09■□□□□ 0.01
CCDC28B-204ENST00000469003 SLC35C2Q9NQQ7 365 aa15.09■□□□□ 0.01
CCDC28B-204ENST00000469003 CRIM1Q9NZV1 1036 aa15.09■□□□□ 0.01
CCDC28B-204ENST00000469003 DCDC2Q9UHG0 476 aa15.09■□□□□ 0.01
CCDC28B-204ENST00000469003 ABCA2Q9BZC7 2435 aa15.08■□□□□ 0.01
CCDC28B-204ENST00000469003 DOCK7Q96N67 2140 aa15.08■□□□□ 0.01
CCDC28B-204ENST00000469003 ANKHD1Q8IWZ3 2542 aaKnown RBP15.08■□□□□ 0.01
CCDC28B-204ENST00000469003 PLOD3O60568 738 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 TSPAN2O60636 221 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 ERN1O75460 977 aaKnown RBP15.08■□□□□ 0
CCDC28B-204ENST00000469003 ANXA4P09525 319 aaPredicted RBP15.08■□□□□ 0
CCDC28B-204ENST00000469003 FAM153BP0C7A2 387 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 CYP4B1P13584 511 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 CPN1P15169 458 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 CTSSP25774 331 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 ART1P52961 327 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 CORO7P57737 925 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 BTKQ06187 659 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 EFR3AQ14156 821 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 FAM153CQ494X1 144 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 FLYWCH1Q4VC44 716 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 SCIMPQ6UWF3 145 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 PLCZ1Q86YW0 608 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 FAM9CQ8IZT9 166 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 OR14L1PQ8NHC6 308 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 FAM222BQ8WU58 562 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 NRGNQ92686 78 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 CCDC126Q96EE4 140 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 DTNBP1Q96EV8 351 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 VSTM2LQ96N03 204 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 EBPLQ9BY08 206 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 POLDIP3Q9BY77 421 aaKnown RBP15.08■□□□□ 0
CCDC28B-204ENST00000469003 EPB41L4BQ9H329 900 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 FOLH1BQ9HBA9 442 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 EMCNQ9ULC0 261 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 WIF1Q9Y5W5 379 aa15.08■□□□□ 0
CCDC28B-204ENST00000469003 FAM221AA4D161 298 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 GLRA3O75311 464 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 IL18BPO95998 194 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 MPIP34949 423 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 OPRM1P35372 400 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 KRT20P35900 424 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 NAA20P61599 178 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 ZNF763Q0D2J5 394 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 ENPP6Q6UWR7 440 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 NPSR1Q6W5P4 371 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 ZYG11AQ6WRX3 759 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 CCNYL1Q8N7R7 359 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 OR7G2Q8NG99 324 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 RNF138Q8WVD3 245 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 NINJ1Q92982 152 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 BBS4Q96RK4 519 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 ADOQ96SZ5 270 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 TUBA1CQ9BQE3 449 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 RHOXF2Q9BQY4 288 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 GPATCH1Q9BRR8 931 aaKnown RBP15.07■□□□□ 0
CCDC28B-204ENST00000469003 STMN4Q9H169 189 aaPredicted RBP15.07■□□□□ 0
CCDC28B-204ENST00000469003 MID1IP1Q9NPA3 183 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 RASSF1Q9NS23 344 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 TAS2R9Q9NYW1 312 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 SENP1Q9P0U3 644 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 TBK1Q9UHD2 729 aa15.07■□□□□ 0
CCDC28B-204ENST00000469003 A0A1W2PPM1 405 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 A6NNC1 897 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 G3V2L1 256 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 H3BQF6 201 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 UBFD1O14562 309 aaKnown RBP15.06■□□□□ 0
CCDC28B-204ENST00000469003 NME6O75414 186 aaPredicted RBP15.06■□□□□ 0
CCDC28B-204ENST00000469003 MYL2P10916 166 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 DDCP20711 480 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 IL12BP29460 328 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 SRD5A2P31213 254 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 SLCO1A2P46721 670 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 IST1P53990 364 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 PNLIPRP2P54317 469 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 FOXA1P55317 472 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 GFRA1P56159 465 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 SPDYAQ5MJ70 313 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 LARP4Q71RC2 724 aaKnown RBP eCLIP15.06■□□□□ 0
CCDC28B-204ENST00000469003 ADGRE4PQ86SQ3 457 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 IFNEQ86WN2 208 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 KIF18BQ86Y91 864 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 TRIM42Q8IWZ5 723 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 C9orf106Q8NAJ2 232 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 RDH11Q8TC12 318 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 CLEC4MQ9H2X3 399 aaPredicted RBP15.06■□□□□ 0
CCDC28B-204ENST00000469003 TAS2R10Q9NYW0 307 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 JKAMPQ9P055 326 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 FBXL2Q9UKC9 423 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 MRPS18CQ9Y3D5 142 aaKnown RBP15.06■□□□□ 0
CCDC28B-204ENST00000469003 MED12Q93074 2177 aa15.06■□□□□ 0
CCDC28B-204ENST00000469003 A0A087WV62 115 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 MYO1GB0I1T2 1018 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms