RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PDXKO00764 312 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 CRLF1O75462 422 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 NDUFA7O95182 113 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 DIRAS3O95661 229 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 APBB3O95704 486 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 ECDO95905 644 aaPredicted RBP4.06□□□□□ -1.76
LSM5-209ENST00000468872 IFNB1P01574 187 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 GSTA1P08263 222 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 PTMSP20962 102 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 RFC2P35250 354 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 SPRP35270 261 aaPredicted RBP4.06□□□□□ -1.76
LSM5-209ENST00000468872 SAA4P35542 130 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 PGFP49763 221 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 MTTPP55157 894 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 FCHO2Q0JRZ9 810 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 PARP6Q2NL67 630 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 REG3GQ6UW15 175 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 METTL7BQ6UX53 244 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 TIPARPQ7Z3E1 657 aaKnown RBP4.06□□□□□ -1.76
LSM5-209ENST00000468872 OR4Q3Q8NH05 313 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 FLVCR1-AS1Q8TAF5 88 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 CCDC110Q8TBZ0 833 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 LHX4Q969G2 390 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 SLC25A36Q96CQ1 311 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 C16orf45Q96MC5 204 aaPredicted RBP4.06□□□□□ -1.76
LSM5-209ENST00000468872 C19orf43Q9BQ61 176 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 RWDD1Q9H446 243 aaPredicted RBP4.06□□□□□ -1.76
LSM5-209ENST00000468872 PANK3Q9H999 370 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 GNB4Q9HAV0 340 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 VAT1LQ9HCJ6 419 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 POLE3Q9NRF9 147 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 GPR83Q9NYM4 423 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 ATXN10Q9UBB4 475 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 MBD2Q9UBB5 411 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 PURGQ9UJV8 347 aaKnown RBP4.06□□□□□ -1.76
LSM5-209ENST00000468872 MGAT4BQ9UQ53 548 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 RNF115Q9Y4L5 304 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 FKBP7Q9Y680 259 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 SMAD5-AS1Q9Y6J3 95 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 ABCA8O94911 1581 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 KDM5CP41229 1560 aa4.06□□□□□ -1.76
LSM5-209ENST00000468872 PRDM2Q13029 1718 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 SHISA9B4DS77 424 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 EI24O14681 340 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 IMPA2O14732 288 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 CHADO15335 359 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 SCGB2A1O75556 95 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 TOM1L1O75674 476 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 TOXO94900 526 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 RRASP10301 218 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 HPDP32754 393 aaPredicted RBP4.05□□□□□ -1.76
LSM5-209ENST00000468872 VCPP55072 806 aaKnown RBP4.05□□□□□ -1.76
LSM5-209ENST00000468872 HAND2P61296 217 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 HERVK_113P63132 956 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 ERVK-8P63133 956 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 PRKCEQ02156 737 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 ZNF85Q03923 595 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 PDZK1IP1Q13113 114 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 SCGB2A2Q13296 93 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 RAPSNQ13702 412 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 CD226Q15762 336 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 TMEM44Q2T9K0 475 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 LINC00242Q5T6M2 205 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 TAF3Q5VWG9 929 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 RFWD3Q6PCD5 774 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 ZNF841Q6ZN19 808 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 SLC47A2Q86VL8 602 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 SUMF1Q8NBK3 374 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 C17orf47Q8NEP4 570 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 DLX4Q92988 240 aaPredicted RBP4.05□□□□□ -1.76
LSM5-209ENST00000468872 TSPAN18Q96SJ8 248 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 ERVK-6Q9BXR3 956 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 ADNPQ9H2P0 1102 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 GDAP2Q9NXN4 497 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 KLK13Q9UKR3 277 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 FOXJ3Q9UPW0 622 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.05□□□□□ -1.76
LSM5-209ENST00000468872 ZFYVE16Q7Z3T8 1539 aa4.05□□□□□ -1.76
LSM5-209ENST00000468872 NPIPA5A0A0B4J1W7 369 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 A0A0J9YVX5 310 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 A0A1B0GTH9 108 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 ANKRD30BLA7E2S9 258 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 FOXI3A8MTJ6 420 aaPredicted RBP4.04□□□□□ -1.76
LSM5-209ENST00000468872 NPIPA5E9PKD4 350 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 H0YL77 283 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.04□□□□□ -1.76
LSM5-209ENST00000468872 VPS26AO75436 327 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 AK1P00568 194 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 CA3P07451 260 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 NCF1P14598 390 aaPredicted RBP4.04□□□□□ -1.76
LSM5-209ENST00000468872 DESP17661 470 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 TSPAN8P19075 237 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 PPP2R1BP30154 601 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 MS4A2Q01362 244 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 HSF2Q03933 536 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 SRYQ05066 204 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 CYLC2Q14093 348 aaPredicted RBP4.04□□□□□ -1.76
LSM5-209ENST00000468872 ACER2Q5QJU3 275 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 SEL1L2Q5TEA6 688 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 FAM219BQ5XKK7 198 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms